amylase, alpha 1A (salivary)

 jump to detail

Synonym

Salivary alpha-amylase precursor, AMY1A, amylase, alpha 1A; salivary, AMY1B

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.90 cerebellum:5.15 brain stem:4.79 corpus callosum/glia:5.16 pineal gland:- peripheral nerve:4.14 spine:4.37 retina:- eye:- artery/aorta:4.31 vein:4.11 lymphnode:5.65 peripheral blood:- spleen:5.40 thymus:5.93 bone marrow:3.78 adipose:4.54 bone:- skin:5.16
CAGE nodata
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.84 placenta:3.24 prostate:4.92 ovary:6.80 testis:4.50 heart:4.49 muscle:5.77 esophagus:4.29 stomach:4 intestine:8.77 colon:3.54 liver/hepato:5.40 lung:4.99 bladder:- kidney:5.11 pituitary:4.51 thyroid/parathyroid:7.67 adrenal gland:4.78 pancreas:13.37 breast:4.84 salivary:12.90
CAGE nodata
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.00 testis:0.00 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.00 adrenal gland:0.00 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_004038
Gene ID 276
Unigene ID -
Probe set ID 208498_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000174876
ENSG00000237763
GTEx ID ENSG00000174876
ENSG00000237763

Orthologous Gene

Mouse[6]  NM_001110505, NM_007446, NM_001042711, NM_001160150, NM_001160151, NM_001160152
Rat[1]  NM_001010970, NM_031502, NM_001042711, NM_001160150, NM_001160151, NM_001160152

Chromosomal Region

1p21.1  [104,197,912  -  104,262,518]
1p21.1  [104,219,358  -  104,239,302]
1p21.1  [104,293,028  -  104,301,312]

Gene Family (Interpro ID)

IPR006048  Alpha-amylase, C-terminal all beta
IPR006046  Glycoside hydrolase family 13
IPR017853  Glycoside hydrolase, catalytic core
IPR013781  Glycoside hydrolase, subgroup, catalytic core
IPR013780  Glycosyl hydrolase, family 13, all-beta
IPR006047  Glycosyl hydrolase, family 13, catalytic domain
IPR006589  Glycosyl hydrolase, family 13, subfamily, catalytic domain

Link to Pubmed  (Pubmed ID)

1710976
2081604
2423416
2424823
2442579
2450054
2452973
2458567
2788608
6176528
6196780
6608795
6610603
7507116
9109822
11858714
12104089
12414807
12477932
12527308
12782315
14637141
15182367
15194503
15286789
15299664
15489334
15708646
16152770
16203048
16740002
17353931
17593303
17828263
17984929
18951906
20967220
21840370
22100627
22391145
22492122
22914593
22965187
23144191
24225843
24686848

Gene Ontology  (GO ID)

-