scavenger receptor cysteine-rich glycoprotein

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Synonym

FLJ35258

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:18.90 thymus:- bone marrow:- adipose:- bone:12.80 skin:-
GeneChip nodata
CAGE cerebrum:1.10 cerebellum:- brain stem:1.01 corpus callosum/glia:1.25 pineal gland:1.12 peripheral nerve:- spine:2.00 retina:- eye:- artery/aorta:3.00 vein:2.52 lymphnode:0.92 peripheral blood:- spleen:2.14 thymus:0.50 bone marrow:- adipose:2.74 bone:- skin:-
RNA-seq cerebrum:0.49 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.13 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.47 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:38.30 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:9.80    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip nodata
CAGE uterus:3.77 placenta:1.39 prostate:2.31 ovary:2.84 testis:2.02 heart:2.26 muscle:1.43 esophagus:2.70 stomach:- intestine:2.19 colon:2.91     liver/hepato:1.07    lung:2.15 bladder:3.24 kidney:1.37 pituitary:2.93 thyroid/parathyroid:0.67 adrenal gland:- pancreas:1.42 breast:2.64 salivary:0.83
RNA-seq uterus:- placenta:- prostate:3.19 ovary:3.31 testis:2.65 heart:0.67 muscle:0.55 esophagus:- stomach:- intestine:- colon:2.93     liver/hepato:0.22        lung:2.14    bladder:- kidney:0.90 pituitary:- thyroid/parathyroid:0.74 adrenal gland:1.24 pancreas:- breast:2.39 salivary:-

Gene Information

IDs

Refseq ID NM_001144950
Gene ID 284297
Unigene ID Hs.554182
Probe set ID -
Ensembl ID ENSG00000179954
GTEx ID ENSG00000179954

Orthologous Gene

Mouse[1]  NM_173008
Rat[1]  NM_001134545

Chromosomal Region

19q13.42  [55,999,870  -  56,030,466]

Gene Family (Interpro ID)

IPR001190  Speract/scavenger receptor
IPR017448  Speract/scavenger receptor related

Link to Pubmed  (Pubmed ID)

12477932
14702039
16344560
19535143

Gene Ontology  (GO ID)

Biological Process

GO:0045087  innate immune response
GO:0007275  multicellular organismal development

Cellular Component

GO:0005737  cytoplasm
GO:0005576  extracellular region
GO:0016020  membrane

Molecular Function

GO:0005044  scavenger receptor activity