synaptophysin-like 2

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Synonym

Mg29, MG29, Synaptophysin-like protein 2, synaptophysin-like 2, SYPL2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:7.10 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip nodata
CAGE cerebrum:0.89 cerebellum:- brain stem:0.73 corpus callosum/glia:0.85 pineal gland:1.23 peripheral nerve:- spine:0.61 retina:- eye:- artery/aorta:2.30 vein:1.86 lymphnode:1.19 peripheral blood:- spleen:0.39 thymus:0.06 bone marrow:- adipose:1.33 bone:- skin:-
RNA-seq cerebrum:0.25 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.29 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.69 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:- prostate:- ovary:- testis:17.30 heart:63.90 muscle:60.30 esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.60        lung:4.90    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:- salivary:-
GeneChip nodata
CAGE uterus:1.98 placenta:0.68 prostate:1.38 ovary:1.43 testis:2.68 heart:2.79 muscle:5.11 esophagus:1.59 stomach:- intestine:0.77 colon:1.25     liver/hepato:2.46    lung:1.23 bladder:2.03 kidney:2.76 pituitary:0.26 thyroid/parathyroid:2.59 adrenal gland:- pancreas:2.26 breast:1.68 salivary:0.62
RNA-seq uterus:- placenta:- prostate:1.78 ovary:1.90 testis:1.88 heart:2.53 muscle:5.15 esophagus:- stomach:- intestine:- colon:1.29     liver/hepato:1.71        lung:0.36    bladder:- kidney:2.96 pituitary:- thyroid/parathyroid:3.95 adrenal gland:0.92 pancreas:- breast:1.82 salivary:-

Gene Information

IDs

Refseq ID NM_001040709
Gene ID 284612
Unigene ID Hs.528366
Probe set ID -
Ensembl ID ENSG00000143028
GTEx ID ENSG00000143028

Orthologous Gene

Mouse[1]  NM_008596
Rat [0]  

Chromosomal Region

1p13.3  [110,009,180  -  110,024,759]

Gene Family (Interpro ID)

IPR008253  Marvel
IPR021128  MARVEL-like domain
IPR001285  Synaptophysin/synaptoporin

Link to Pubmed  (Pubmed ID)

12477932
12975309
14702039
16344560
16710414
20125088
20383146
21963094
22290180

Gene Ontology  (GO ID)

Biological Process

GO:0006874  cellular calcium ion homeostasis

Cellular Component

GO:0016021  integral to membrane
GO:0008021  synaptic vesicle

Molecular Function

GO:0005215  transporter activity