SFRS12-interacting protein 1

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Synonym

MGC131910, FLJ36754, P18SRP, P18SRP protein

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:30.30 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:4.99 cerebellum:5.13 brain stem:4.59 corpus callosum/glia:5.36 pineal gland:- peripheral nerve:5.28 spine:4.95 retina:- eye:- artery/aorta:4.89 vein:4.96 lymphnode:5.10 peripheral blood:- spleen:5.17 thymus:5.32 bone marrow:4.68 adipose:4.62 bone:- skin:5.28
CAGE cerebrum:3.16 cerebellum:- brain stem:3.27 corpus callosum/glia:2.41 pineal gland:4.15 peripheral nerve:- spine:3.63 retina:- eye:- artery/aorta:2.89 vein:2.99 lymphnode:2.95 peripheral blood:- spleen:3.71 thymus:3.57 bone marrow:- adipose:3.63 bone:- skin:-
RNA-seq cerebrum:2.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.29 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.27 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:3.60 prostate:11.30 ovary:- testis:- heart:- muscle:40.20 esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:4.90    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:- salivary:-
GeneChip uterus:5.36 placenta:5.44 prostate:5.10 ovary:6.01 testis:4.54 heart:4.96 muscle:4.89 esophagus:5.77 stomach:4.92 intestine:4.92 colon:4.64 liver/hepato:4.64 lung:5.33 bladder:- kidney:4.88 pituitary:4.88 thyroid/parathyroid:5.40 adrenal gland:5.15 pancreas:4.74 breast:5.75 salivary:5.10
CAGE uterus:3.43 placenta:3.68 prostate:3.64 ovary:3.25 testis:3.09 heart:3.25 muscle:3.36 esophagus:4.00 stomach:- intestine:3.51 colon:2.69     liver/hepato:3.22    lung:3.43 bladder:3.97 kidney:3.62 pituitary:3.74 thyroid/parathyroid:3.35 adrenal gland:- pancreas:2.34 breast:3.38 salivary:2.17
RNA-seq uterus:- placenta:- prostate:3.06 ovary:2.73 testis:3.02 heart:1.98 muscle:1.66 esophagus:- stomach:- intestine:- colon:3.00     liver/hepato:1.88        lung:2.33    bladder:- kidney:2.61 pituitary:- thyroid/parathyroid:2.59 adrenal gland:2.88 pancreas:- breast:3.05 salivary:-

Gene Information

IDs

Refseq ID NM_173829
Gene ID 285672
Unigene ID Hs.69504
Probe set ID 217608_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000153006
GTEx ID ENSG00000153006

Orthologous Gene

Mouse[1]  NM_026075
Rat[1]  NM_026075

Chromosomal Region

5q12.3  [64,016,338  -  64,064,512]

Gene Family (Interpro ID)

IPR001878  Zinc finger, CCHC-type

Link to Pubmed  (Pubmed ID)

12477932
14702039
15456940
20379614

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0008380  RNA splicing

Molecular Function

GO:0003676  nucleic acid binding
GO:0008270  zinc ion binding