nuclear receptor subfamily 4, group A, member 1

Synonym

nuclear receptor subfamily 4, group A, member 1, N10, HMR, NAK1, NR4A1, Early response protein NAK1, TR3 orphan receptor, Orphan nuclear receptor HMR, NUR77, NP10, NAK-1, MGC9485, ST-59, GFRP1, NGFIB, Orphan nuclear receptor NR4A1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:78.20

cerebellum:25.20

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:521.40

spine:3705.80

retina:118.60

eye:170.40

artery/aorta:-

vein:-

lymphnode:50.60

peripheral blood:91.10

spleen:245.80

thymus:90.20

bone marrow:-

adipose:968

bone:25.60

skin:86.40

GeneChip

cerebrum:6.89

cerebellum:6.97

brain stem:6.72

corpus callosum/glia:7.03

pineal gland:-

peripheral nerve:8.39

spine:7.72

retina:-

eye:-

artery/aorta:9.07

vein:9.18

lymphnode:7.67

peripheral blood:-

spleen:7.28

thymus:7.33

bone marrow:7.25

adipose:8.27

bone:-

skin:7.99

CAGE

cerebrum:3.41

cerebellum:-

brain stem:3.95

corpus callosum/glia:4.96

pineal gland:4.36

peripheral nerve:-

spine:3.81

retina:-

eye:-

artery/aorta:6.54

vein:5.53

lymphnode:3.67

peripheral blood:-

spleen:3.20

thymus:4.13

bone marrow:-

adipose:5.09

bone:-

skin:-

RNA-seq

cerebrum:0.33

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:1.19

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.98

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:355.40

placenta:40.10

prostate:202.80

ovary:149.10

testis:51.90

heart:25.50

muscle:60.30

esophagus:-

stomach:21.20

intestine:32.40

colon:229

liver/hepato:21.10

lung:439.90

bladder:502.40

kidney:124.80

pituitary:116

thyroid/parathyroid:327.50

adrenal gland:1117.30

pancreas:106.70

breast:27.90

salivary:328.40

GeneChip

uterus:7.91

placenta:6.61

prostate:9.45

ovary:8.75

testis:7.31

heart:8.45

muscle:7.95

esophagus:7.50

stomach:8.03

intestine:7.69

colon:7.35

liver/hepato:7.24

lung:8.98

bladder:-

kidney:8.12

pituitary:8.70

thyroid/parathyroid:8.60

adrenal gland:9.12

pancreas:7.45

breast:7.83

salivary:8.40

CAGE

uterus:5.63

placenta:3.67

prostate:6.44

ovary:7.04

testis:4.54

heart:5.85

muscle:6.07

esophagus:5.30

stomach:-

intestine:5.04

colon:4.40

liver/hepato:4.17

lung:5.88

bladder:6.15

kidney:3.73

pituitary:5.06

thyroid/parathyroid:4.27

adrenal gland:-

pancreas:4.39

breast:4.62

salivary:6.16

RNA-seq

uterus:-

placenta:-

prostate:6.13

ovary:5.41

testis:3.33

heart:1.80

muscle:2.51

esophagus:-

stomach:-

intestine:-

colon:2.27

liver/hepato:0.26

lung:4.29

bladder:-

kidney:0.47

pituitary:-

thyroid/parathyroid:3.05

adrenal gland:1.28

pancreas:-

breast:2.88

salivary:-

IDs

Refseq ID	NM_002135
Gene ID	3164
Unigene ID	Hs.524430
Probe set ID	202340_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000123358
GTEx ID	ENSG00000123358

Orthologous Gene

Mouse[1]	NM_010444
Rat [0]

Chromosomal Region

12q13.13 [52,416,616 - 52,453,291]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR003070	Orphan nuclear receptor
IPR003071	Orphan nuclear receptor, HMR type
IPR001723	Steroid hormone receptor
IPR013088	Zinc finger, NHR/GATA-type
IPR001628	Zinc finger, nuclear hormone receptor-type

Gene Ontology (GO ID)

Biological Process

GO:0002042	cell migration involved in sprouting angiogenesis
GO:0007173	epidermal growth factor receptor signaling pathway
GO:0008543	fibroblast growth factor receptor signaling pathway
GO:0010467	gene expression
GO:0006917	induction of apoptosis
GO:0045087	innate immune response
GO:0030522	intracellular receptor-mediated signaling pathway
GO:0043154	negative regulation of caspase activity
GO:0048011	nerve growth factor receptor signaling pathway
GO:0048015	phosphoinositide-mediated signaling
GO:0001938	positive regulation of endothelial cell proliferation
GO:0007165	signal transduction
GO:0006367	transcription initiation from RNA polymerase II promoter

Cellular Component

GO:0005654	nucleoplasm
GO:0005634	nucleus
GO:0005667	transcription factor complex

Molecular Function

GO:0003677	DNA binding
GO:0004879	ligand-dependent nuclear receptor activity
GO:0005515	protein binding
GO:0046982	protein heterodimerization activity
GO:0042803	protein homodimerization activity
GO:0043565	sequence-specific DNA binding
GO:0003707	steroid hormone receptor activity
GO:0008270	zinc ion binding

nuclear receptor subfamily 4, group A, member 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function