tenascin C

Synonym

JI, Hexabrachion, HXB, Glioma-associated-extracellular matrix antigen, TN-C, GP 150-225, GMEM, TN, Myotendinous antigen, Tenascin precursor, tenascin C (hexabrachion), Neuronectin, Tenascin-C, Cytotactin, TNC

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:39.10

cerebellum:-

brain stem:-

corpus callosum/glia:116.60

pineal gland:-

peripheral nerve:306.70

spine:-

retina:-

eye:58.80

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:12.90

bone marrow:19.70

adipose:80.70

bone:537.40

skin:312

GeneChip

cerebrum:5.53

cerebellum:4.06

brain stem:6.02

corpus callosum/glia:7.01

pineal gland:-

peripheral nerve:6.19

spine:6.90

retina:-

eye:-

artery/aorta:6.75

vein:10.07

lymphnode:7.77

peripheral blood:-

spleen:8.30

thymus:6.10

bone marrow:7.08

adipose:6.85

bone:-

skin:6.54

CAGE

cerebrum:2.31

cerebellum:-

brain stem:2.65

corpus callosum/glia:4.18

pineal gland:1.59

peripheral nerve:-

spine:2.53

retina:-

eye:-

artery/aorta:4.24

vein:4.36

lymphnode:4.82

peripheral blood:-

spleen:4.58

thymus:2.71

bone marrow:-

adipose:3.54

bone:-

skin:-

RNA-seq

cerebrum:2.41

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.72

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.37

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:273.40

placenta:65.60

prostate:56.30

ovary:37.30

testis:43.30

heart:25.50

muscle:-

esophagus:-

stomach:42.50

intestine:97.20

colon:220.50

liver/hepato:10.60

lung:180.80

bladder:-

kidney:52

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:26.70

breast:167.30

salivary:-

GeneChip

uterus:8.46

placenta:5.30

prostate:7.73

ovary:4.77

testis:5.15

heart:6.35

muscle:4.69

esophagus:6.93

stomach:8.02

intestine:8.08

colon:8.11

liver/hepato:4.26

lung:6.24

bladder:-

kidney:7.27

pituitary:5.19

thyroid/parathyroid:5.30

adrenal gland:5.63

pancreas:4.51

breast:7.85

salivary:5.48

CAGE

uterus:4.65

placenta:2.60

prostate:3.52

ovary:3.73

testis:2.57

heart:4.05

muscle:3.74

esophagus:4.12

stomach:-

intestine:3.94

colon:4.64

liver/hepato:2.12

lung:3.58

bladder:4.30

kidney:4.11

pituitary:1.84

thyroid/parathyroid:2.70

adrenal gland:-

pancreas:0.94

breast:3.12

salivary:2.75

RNA-seq

uterus:-

placenta:-

prostate:2.67

ovary:1.27

testis:2.61

heart:0.96

muscle:0.87

esophagus:-

stomach:-

intestine:-

colon:4.71

liver/hepato:0.31

lung:4.57

bladder:-

kidney:4.31

pituitary:-

thyroid/parathyroid:1.80

adrenal gland:5.51

pancreas:-

breast:2.78

salivary:-

IDs

Refseq ID	NM_002160
Gene ID	3371
Unigene ID	Hs.143250
Probe set ID	201645_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000041982
GTEx ID	ENSG00000041982

Orthologous Gene

Mouse[1]	NM_011607
Rat[1]	NM_011607

Chromosomal Region

9q33.1 [117,782,806 - 117,880,536]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000742	EGF-like, type 3
IPR003961	Fibronectin, type III
IPR008957	Fibronectin, type III-like fold

GO:0014012	axon regeneration in the peripheral nervous system
GO:0007155	cell adhesion
GO:0030198	extracellular matrix organization
GO:0060739	mesenchymal-epithelial cell signaling involved in prostate gland development
GO:0007528	neuromuscular junction development
GO:0008284	positive regulation of cell proliferation
GO:0010628	positive regulation of gene expression
GO:0060740	prostate gland epithelium morphogenesis
GO:0009611	response to wounding

GO:0005604	basement membrane
GO:0031012	extracellular matrix
GO:0005576	extracellular region
GO:0005615	extracellular space
GO:0005614	interstitial matrix

tenascin C

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function