interferon, gamma-inducible protein 16

jump to detail

Synonym

interferon, gamma-inducible protein 16, IFI 16, IFNGIP1, IFI16, Gamma-interferon-inducible protein Ifi-16, PYHIN2, MGC9466

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:48.60 cerebellum:- brain stem:- corpus callosum/glia:116.60 pineal gland:- peripheral nerve:61.30 spine:- retina:237.30 eye:29.40 artery/aorta:329.70 vein:66.60 lymphnode:293.20 peripheral blood:291.50 spleen:132.30 thymus:438 bone marrow:118.10 adipose:121 bone:230.30 skin:187.20
GeneChip cerebrum:5.77 cerebellum:4.35 brain stem:6.33 corpus callosum/glia:6.86 pineal gland:- peripheral nerve:7.74 spine:7.17 retina:- eye:- artery/aorta:8.09 vein:8.49 lymphnode:8.85 peripheral blood:- spleen:9.10 thymus:9.30 bone marrow:7.55 adipose:8.47 bone:- skin:8.13
CAGE cerebrum:3.55 cerebellum:- brain stem:4.08 corpus callosum/glia:3.69 pineal gland:3.54 peripheral nerve:- spine:5.08 retina:- eye:- artery/aorta:3.94 vein:4.87 lymphnode:4.95 peripheral blood:- spleen:5.47 thymus:5.57 bone marrow:- adipose:5.54 bone:- skin:-
RNA-seq cerebrum:3.24 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.95 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.25 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:328.10 placenta:47.40 prostate:78.90 ovary:149.10 testis:47.60 heart:127.70 muscle:40.20 esophagus:- stomach:148.70 intestine:97.20 colon:76.30     liver/hepato:52.80        lung:146.60    bladder:251.20 kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:37.20 salivary:-
GeneChip uterus:8.63 placenta:7.35 prostate:7.19 ovary:9.06 testis:5.83 heart:7.62 muscle:5.32 esophagus:8.12 stomach:7.30 intestine:7.22 colon:6.55 liver/hepato:6.51 lung:8.81 bladder:- kidney:5.56 pituitary:4.93 thyroid/parathyroid:7.04 adrenal gland:7.75 pancreas:5.97 breast:7.91 salivary:6
CAGE uterus:4.75 placenta:4.13 prostate:4.54 ovary:4.84 testis:3.52 heart:4.38 muscle:3.54 esophagus:4.85 stomach:- intestine:3.93 colon:3.77     liver/hepato:3.56    lung:4.99 bladder:4.74 kidney:3.93 pituitary:3.23 thyroid/parathyroid:4.04 adrenal gland:- pancreas:2.41 breast:4.62 salivary:2.90
RNA-seq uterus:- placenta:- prostate:4.76 ovary:5.17 testis:4.73 heart:3.39 muscle:2.44 esophagus:- stomach:- intestine:- colon:5.03     liver/hepato:1.91        lung:5.40    bladder:- kidney:3.65 pituitary:- thyroid/parathyroid:4.05 adrenal gland:5.60 pancreas:- breast:4.27 salivary:-

Gene Ontology  (GO ID)

Biological Process

GO:0002218  activation of innate immune response
GO:0006914  autophagy
GO:0008283  cell proliferation
GO:0042149  cellular response to glucose starvation
GO:0071479  cellular response to ionizing radiation
GO:0051607  defense response to virus
GO:0042771  DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis
GO:0030097  hemopoiesis
GO:0006954  inflammatory response
GO:0045087  innate immune response
GO:0030224  monocyte differentiation
GO:0030099  myeloid cell differentiation
GO:0043392  negative regulation of DNA binding
GO:0045824  negative regulation of innate immune response
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0045071  negative regulation of viral genome replication
GO:0001819  positive regulation of cytokine production
GO:0032731  positive regulation of interleukin-1 beta production
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0032481  positive regulation of type I interferon production
GO:0010506  regulation of autophagy
GO:0006355  regulation of transcription, DNA-dependent
GO:0009615  response to virus
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0016607  nuclear speck
GO:0005730  nucleolus
GO:0005654  nucleoplasm
GO:0005634  nucleus

Molecular Function

GO:0003690  double-stranded DNA binding
GO:0005515  protein binding
GO:0008134  transcription factor binding