solute carrier family 10 (sodium/bile acid cotransporter family), member 6

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Synonym

SOAT, SLC10A6, MGC129575, MGC129576

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:19.20
GeneChip nodata
CAGE cerebrum:0.21 cerebellum:- brain stem:0.61 corpus callosum/glia:0.13 pineal gland:0 peripheral nerve:- spine:0.47 retina:- eye:- artery/aorta:1.28 vein:1.10 lymphnode:0.53 peripheral blood:- spleen:0.17 thymus:0.06 bone marrow:- adipose:2.87 bone:- skin:-
RNA-seq cerebrum:0.28 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.09 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.94 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:1.23 placenta:0.24 prostate:0.58 ovary:0.32 testis:0.53 heart:0.45 muscle:0.92 esophagus:1.99 stomach:- intestine:0.33 colon:0.75     liver/hepato:0    lung:0.56 bladder:1.47 kidney:0.15 pituitary:1.17 thyroid/parathyroid:0.64 adrenal gland:- pancreas:0 breast:2.53 salivary:0
RNA-seq uterus:- placenta:- prostate:0.74 ovary:0.10 testis:0.97 heart:0.37 muscle:1.13 esophagus:- stomach:- intestine:- colon:1.90     liver/hepato:0        lung:0.81    bladder:- kidney:0.25 pituitary:- thyroid/parathyroid:0.57 adrenal gland:0.31 pancreas:- breast:1.27 salivary:-

Gene Information

IDs

Refseq ID NM_197965
Gene ID 345274
Unigene ID Hs.452996
Probe set ID -
Ensembl ID ENSG00000145283
GTEx ID ENSG00000145283

Orthologous Gene

Mouse[1]  NM_029415
Rat [0]  

Chromosomal Region

4q21.3  [87,744,621  -  87,770,416]

Gene Family (Interpro ID)

IPR004710  Bile acid transporter
IPR002657  Bile acid:sodium symporter

Link to Pubmed  (Pubmed ID)

12477932
16541252
17491011
22791750

Gene Ontology  (GO ID)

Biological Process

GO:0043251  sodium-dependent organic anion transport
GO:0055085  transmembrane transport

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0008508  bile acid:sodium symporter activity
GO:0043250  sodium-dependent organic anion transmembrane transporter activity