WD repeat domain 53

 jump to detail

Synonym

WD repeat protein 53, MGC64882, WD repeat domain 53, WDR53

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:2.40 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:40.40 peripheral blood:- spleen:- thymus:12.90 bone marrow:19.70 adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:1.57 cerebellum:- brain stem:1.57 corpus callosum/glia:1.47 pineal gland:2.12 peripheral nerve:- spine:1.71 retina:- eye:- artery/aorta:1.28 vein:1.17 lymphnode:1.39 peripheral blood:- spleen:1.43 thymus:1.72 bone marrow:- adipose:0.84 bone:- skin:-
RNA-seq cerebrum:2.16 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.02 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.73 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:- prostate:- ovary:- testis:60.60 heart:76.60 muscle:- esophagus:- stomach:21.20 intestine:32.40 colon:17     liver/hepato:-        lung:9.80    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:37.20 salivary:-
GeneChip nodata
CAGE uterus:1.33 placenta:1.37 prostate:1.30 ovary:1.08 testis:3.54 heart:1.00 muscle:1.16 esophagus:0.90 stomach:- intestine:1.46 colon:1.37     liver/hepato:0.63    lung:0.97 bladder:1.21 kidney:1.28 pituitary:1.99 thyroid/parathyroid:1.27 adrenal gland:- pancreas:1.21 breast:1.16 salivary:0.83
RNA-seq uterus:- placenta:- prostate:2.48 ovary:2.56 testis:4.90 heart:1.39 muscle:1.78 esophagus:- stomach:- intestine:- colon:2.03     liver/hepato:1.79        lung:1.48    bladder:- kidney:1.92 pituitary:- thyroid/parathyroid:2.88 adrenal gland:2.48 pancreas:- breast:2.29 salivary:-

Gene Information

IDs

Refseq ID NM_182627
Gene ID 348793
Unigene ID Hs.385865
Probe set ID -
Ensembl ID ENSG00000185798
GTEx ID ENSG00000185798

Orthologous Gene

Mouse[1]  NM_001185162, NM_026898
Rat[1]  NM_001109055, NM_026898

Chromosomal Region

3q29  [196,281,056  -  196,295,545]

Gene Family (Interpro ID)

IPR001680  WD40 repeat
IPR019782  WD40 repeat 2
IPR019781  WD40 repeat, subgroup
IPR011046  WD40 repeat-like-containing domain
IPR017986  WD40-repeat-containing domain
IPR015943  WD40/YVTN repeat-like-containing domain

Link to Pubmed  (Pubmed ID)

12477932
15489334
17041588
17207965

Gene Ontology  (GO ID)

-