integrin, beta 5

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Synonym

integrin, beta 5, ITGB5, FLJ26658, Integrin beta-5 precursor

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:40.30

cerebellum:50.40

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:30.70

spine:112.30

retina:118.60

eye:146.90

artery/aorta:30

vein:-

lymphnode:-

peripheral blood:54.70

spleen:151.30

thymus:77.30

bone marrow:78.70

adipose:121

bone:268.70

skin:120

GeneChip

cerebrum:6.99

cerebellum:6.78

brain stem:7.12

corpus callosum/glia:7.43

pineal gland:-

peripheral nerve:7.53

spine:7.67

retina:-

eye:-

artery/aorta:8.99

vein:8.50

lymphnode:6.83

peripheral blood:-

spleen:7.65

thymus:6.42

bone marrow:6.70

adipose:8.44

bone:-

skin:8.31

CAGE

cerebrum:2.40

cerebellum:-

brain stem:2.92

corpus callosum/glia:3.33

pineal gland:2.11

peripheral nerve:-

spine:2.91

retina:-

eye:-

artery/aorta:5.12

vein:3.47

lymphnode:2.58

peripheral blood:-

spleen:3.52

thymus:1.66

bone marrow:-

adipose:4.92

bone:-

skin:-

RNA-seq

cerebrum:2.80

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.35

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:6.68

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:191.40

placenta:171.20

prostate:146.40

ovary:111.80

testis:26

heart:51.10

muscle:-

esophagus:-

stomach:63.70

intestine:64.80

colon:101.80

liver/hepato:179.40

lung:132

bladder:-

kidney:72.80

pituitary:116

thyroid/parathyroid:-

adrenal gland:-

pancreas:53.30

breast:139.40

salivary:-

GeneChip

uterus:8.33

placenta:7.91

prostate:8.04

ovary:8.01

testis:6.79

heart:8.08

muscle:7.05

esophagus:8.30

stomach:7.56

intestine:7.68

colon:7.88

liver/hepato:7.89

lung:7.84

bladder:-

kidney:8.20

pituitary:7.34

thyroid/parathyroid:7.63

adrenal gland:7.72

pancreas:7.14

breast:8.63

salivary:7.67

CAGE

uterus:4.18

placenta:4.12

prostate:3.80

ovary:3.47

testis:3.28

heart:3.95

muscle:2.94

esophagus:3.87

stomach:-

intestine:3.35

colon:3.63

liver/hepato:3.54

lung:3.49

bladder:3.78

kidney:3.55

pituitary:2.03

thyroid/parathyroid:3.49

adrenal gland:-

pancreas:3.10

breast:4.56

salivary:3.13

RNA-seq

uterus:-

placenta:-

prostate:4.92

ovary:4.14

testis:4.28

heart:4.25

muscle:4.12

esophagus:-

stomach:-

intestine:-

colon:5.37

liver/hepato:4.40

lung:4.71

bladder:-

kidney:4.74

pituitary:-

thyroid/parathyroid:4.44

adrenal gland:4.01

pancreas:-

breast:6.00

salivary:-

IDs

Refseq ID	NM_002213
Gene ID	3693
Unigene ID	Hs.536663
Probe set ID	201125_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000082781
GTEx ID	ENSG00000082781

Orthologous Gene

Mouse[8]	NM_001145884, NM_010580
Rat[1]	NM_147139, NM_010580

Chromosomal Region

3q21.2 [124,480,795 - 124,606,674]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR015812	Integrin beta subunit
IPR003659	Plexin/semaphorin/integrin

GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002474	antigen processing and presentation of peptide antigen via MHC class I
GO:0007155	cell adhesion
GO:0030198	extracellular matrix organization
GO:0007229	integrin-mediated signaling pathway
GO:0007275	multicellular organismal development
GO:0006936	muscle contraction

GO:0031252	cell leading edge
GO:0005925	focal adhesion
GO:0008305	integrin complex
GO:0045335	phagocytic vesicle
GO:0005886	plasma membrane

GO:0005178	integrin binding
GO:0005515	protein binding
GO:0004872	receptor activity

integrin, beta 5

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function