von Willebrand factor A domain containing 5A

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Synonym

BCSC-1, LOH11CR2A, Breast cancer suppressor candidate 1, BCSC1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:53.30 cerebellum:50.40 brain stem:- corpus callosum/glia:116.60 pineal gland:- peripheral nerve:61.30 spine:- retina:118.60 eye:17.60 artery/aorta:- vein:- lymphnode:- peripheral blood:36.40 spleen:37.80 thymus:25.80 bone marrow:19.70 adipose:- bone:204.70 skin:24
GeneChip cerebrum:5.21 cerebellum:4.34 brain stem:5.77 corpus callosum/glia:4.95 pineal gland:- peripheral nerve:6.01 spine:5.38 retina:- eye:- artery/aorta:5.92 vein:5.25 lymphnode:5.34 peripheral blood:- spleen:5.07 thymus:5.14 bone marrow:4.57 adipose:5.22 bone:- skin:5.67
CAGE cerebrum:2.46 cerebellum:- brain stem:2.62 corpus callosum/glia:2.41 pineal gland:2.61 peripheral nerve:- spine:2.98 retina:- eye:- artery/aorta:2.95 vein:2.03 lymphnode:2.19 peripheral blood:- spleen:2.00 thymus:1.65 bone marrow:- adipose:3.02 bone:- skin:-
RNA-seq cerebrum:1.77 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.05 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.09 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:76.50 prostate:123.90 ovary:- testis:17.30 heart:- muscle:20.10 esophagus:- stomach:- intestine:162 colon:33.90     liver/hepato:21.10        lung:151.50    bladder:- kidney:83.20 pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:71.10 breast:9.30 salivary:-
GeneChip uterus:5.69 placenta:6.91 prostate:5.79 ovary:5.19 testis:4.58 heart:4.76 muscle:4.36 esophagus:5.65 stomach:5.95 intestine:5.66 colon:5.57 liver/hepato:4.64 lung:6.07 bladder:- kidney:5.21 pituitary:6.56 thyroid/parathyroid:5.38 adrenal gland:5.60 pancreas:5.18 breast:5.86 salivary:5.78
CAGE uterus:2.87 placenta:3.47 prostate:3.47 ovary:2.56 testis:2.40 heart:2.03 muscle:1.33 esophagus:2.86 stomach:- intestine:3.45 colon:3.11     liver/hepato:1.76    lung:2.78 bladder:2.65 kidney:3.00 pituitary:3.94 thyroid/parathyroid:2.85 adrenal gland:- pancreas:2.98 breast:2.87 salivary:3.86
RNA-seq uterus:- placenta:- prostate:2.02 ovary:1.27 testis:1.79 heart:0.55 muscle:0.60 esophagus:- stomach:- intestine:- colon:1.72     liver/hepato:0.61        lung:2.68    bladder:- kidney:2.77 pituitary:- thyroid/parathyroid:1.54 adrenal gland:1.34 pancreas:- breast:1.59 salivary:-

Gene Information

IDs

Refseq ID NM_198315
Gene ID 4013
Unigene ID Hs.152944
Probe set ID 210102_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000110002
GTEx ID ENSG00000110002

Orthologous Gene

Mouse[5]  NM_001145957, NM_172767, NM_001199556, NM_178737
Rat [0]  

Chromosomal Region

11q24.2  [123,986,069  -  124,018,428]

Gene Family (Interpro ID)

IPR013694  Vault protein inter-alpha-trypsin
IPR006587  Vault protein inter-alpha-trypsin, metazoa

Link to Pubmed  (Pubmed ID)

8889548
9417908
12477932
14504409
15489334
18029348
19656157
20972266
21782286
21803008
21832049
21963094
21987572
22594792
22939629
23251661

Gene Ontology  (GO ID)

Cellular Component

GO:0005730  nucleolus
GO:0005634  nucleus