low density lipoprotein receptor-related protein 6

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Synonym

LRP6, FLJ90062, low density lipoprotein receptor-related protein 6, FLJ90421

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:7.49 cerebellum:7.25 brain stem:7.49 corpus callosum/glia:7.58 pineal gland:- peripheral nerve:7.75 spine:7.45 retina:- eye:- artery/aorta:7.58 vein:7.40 lymphnode:6.83 peripheral blood:- spleen:6.71 thymus:5.91 bone marrow:6.56 adipose:7.57 bone:- skin:7.15
CAGE cerebrum:2.90 cerebellum:- brain stem:2.98 corpus callosum/glia:3.10 pineal gland:2.80 peripheral nerve:- spine:2.74 retina:- eye:- artery/aorta:3.01 vein:2.33 lymphnode:1.87 peripheral blood:- spleen:1.74 thymus:2.13 bone marrow:- adipose:2.39 bone:- skin:-
RNA-seq cerebrum:2.42 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.05 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.20 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:7.81 placenta:7.11 prostate:7.60 ovary:7.56 testis:7.05 heart:7.58 muscle:7.59 esophagus:7.11 stomach:7.77 intestine:7.47 colon:7.38 liver/hepato:8.38 lung:7.62 bladder:- kidney:7.89 pituitary:7.31 thyroid/parathyroid:7.23 adrenal gland:7.32 pancreas:7.48 breast:7.43 salivary:7.73
CAGE uterus:3.41 placenta:2.78 prostate:2.77 ovary:2.96 testis:2.79 heart:2.68 muscle:2.63 esophagus:2.32 stomach:- intestine:2.52 colon:2.65     liver/hepato:2.95    lung:3.16 bladder:2.68 kidney:2.74 pituitary:2.87 thyroid/parathyroid:2.67 adrenal gland:- pancreas:2.66 breast:2.02 salivary:2.99
RNA-seq uterus:- placenta:- prostate:2.74 ovary:3.00 testis:2.72 heart:1.93 muscle:1.50 esophagus:- stomach:- intestine:- colon:2.98     liver/hepato:2.66        lung:2.94    bladder:- kidney:3.02 pituitary:- thyroid/parathyroid:2.98 adrenal gland:2.04 pancreas:- breast:2.78 salivary:-

Gene Information

IDs

Refseq ID NM_002336
Gene ID 4040
Unigene ID -
Probe set ID 205606_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000070018
GTEx ID ENSG00000070018

Orthologous Gene

Mouse[2]  NM_008514
Rat[1]  NM_001107892

Chromosomal Region

12p13.2  [12,268,959  -  12,419,946]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889549
9704021
10036184
11029007
11357136
11448771
11742004
12121999
12477932
12581525
12857724
12897152
14702039
14739301
15035989
15084453
15271658
15342556
15469977
15489334
15516984
15908424
16263759
16355283
16365045
16384981
16513652
16543246
16564009
16815997
16890161
16989816
17326769
17332414
17376403
17517621
17569865
17698587
17765217
17804805
18077588
18083125
18215320
18350154
18362152
18378904
18406176
18493104
18502762
18505732
18524778
18606139
18676680
18717822
18762581
18772438
18838381
18948618
18981475
19015224
19107203
19170196
19293931
19339249
19453261
19477926
19625176
19667113
19692168
19711366
19801552
19833493
19881541
19898734
19910923
19913121
20053636
20057906
20093360
20128690
20137080
20194742
20227366
20351274
20388731
20390408
20460648
20543981
20628086
20676368
20846389
20926594
20974802
21139048
21245321
21397183
21536646
21887268
21906983
21944579
21963094
21984209
22000855
22000856
22128165
22372892
22393312
22490400
22570728
22575959
22589387
22606268
22645275
22682247
22696217
22871567
22899650
22907437
23000965
23077088
23218566
23302227
23306204
23395167
23638027
23666756
23703864
23754096
23773994
23811937
23870195
23959799
23987510
24265322
24289859
24412065
24639526

Gene Ontology  (GO ID)

Biological Process

GO:0009952  anterior/posterior pattern formation
GO:0060349  bone morphogenesis
GO:0046849  bone remodeling
GO:0060444  branching involved in mammary gland duct morphogenesis
GO:0042074  cell migration involved in gastrulation
GO:0071397  cellular response to cholesterol
GO:0021587  cerebellum morphogenesis
GO:0021795  cerebral cortex cell migration
GO:0021987  cerebral cortex development
GO:0060026  convergent extension
GO:0048596  embryonic camera-type eye morphogenesis
GO:0042733  embryonic digit morphogenesis
GO:0035115  embryonic forelimb morphogenesis
GO:0035116  embryonic hindlimb morphogenesis
GO:0030326  embryonic limb morphogenesis
GO:0009880  embryonic pattern specification
GO:0060059  embryonic retina morphogenesis in camera-type eye
GO:0035261  external genitalia morphogenesis
GO:0060325  face morphogenesis
GO:0021943  formation of radial glial scaffolds
GO:0001702  gastrulation with mouth forming second
GO:0001947  heart looping
GO:0060596  mammary placode formation
GO:0030901  midbrain development
GO:0030917  midbrain-hindbrain boundary development
GO:0050680  negative regulation of epithelial cell proliferation
GO:0045599  negative regulation of fat cell differentiation
GO:0001933  negative regulation of protein amino acid phosphorylation
GO:0006469  negative regulation of protein kinase activity
GO:0034392  negative regulation of smooth muscle cell apoptosis
GO:0014033  neural crest cell differentiation
GO:0014029  neural crest formation
GO:0001843  neural tube closure
GO:0042475  odontogenesis of dentine-containing tooth
GO:0060021  palate development
GO:0003344  pericardium morphogenesis
GO:0043065  positive regulation of apoptosis
GO:0045780  positive regulation of bone resorption
GO:0045787  positive regulation of cell cycle
GO:0002053  positive regulation of mesenchymal cell proliferation
GO:0045778  positive regulation of ossification
GO:0051091  positive regulation of transcription factor activity
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0090009  primitive streak formation
GO:0021861  radial glial cell differentiation in the forebrain
GO:0090118  receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport
GO:0060284  regulation of cell development
GO:0045598  regulation of fat cell differentiation
GO:0030278  regulation of ossification
GO:0051593  response to folic acid
GO:0007268  synaptic transmission
GO:0021794  thalamus development
GO:0060535  trachea cartilage morphogenesis
GO:0016055  Wnt receptor signaling pathway
GO:0021874  Wnt receptor signaling pathway in forebrain neuroblast division
GO:0060070  Wnt receptor signaling pathway through beta-catenin

Cellular Component

GO:0005901  caveola
GO:0043025  cell soma
GO:0009986  cell surface
GO:0031410  cytoplasmic vesicle
GO:0005769  early endosome
GO:0005783  endoplasmic reticulum
GO:0016021  integral to membrane
GO:0005886  plasma membrane
GO:0043235  receptor complex
GO:0045202  synapse

Molecular Function

GO:0034185  apolipoprotein binding
GO:0005109  frizzled binding
GO:0019210  kinase inhibitor activity
GO:0005041  low-density lipoprotein receptor activity
GO:0005515  protein binding
GO:0042803  protein homodimerization activity
GO:0005102  receptor binding
GO:0019534  toxin transporter activity
GO:0042813  Wnt receptor activity
GO:0017147  Wnt-protein binding