lymphocyte antigen 6 complex, locus E

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Synonym

Retinoic acid-induced gene E protein, 9804, TSA-1, SCA2, SCA-2, LY6E, RIGE, lymphocyte antigen 6 complex, locus E, RIG-E, Thymic shared antigen 1, Stem cell antigen 2, TSA1, Lymphocyte antigen Ly-6E precursor

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:116.10 cerebellum:25.20 brain stem:- corpus callosum/glia:- pineal gland:593.40 peripheral nerve:61.30 spine:112.30 retina:- eye:135.20 artery/aorta:60 vein:66.60 lymphnode:30.30 peripheral blood:54.70 spleen:75.60 thymus:25.80 bone marrow:- adipose:80.70 bone:102.40 skin:81.60
GeneChip cerebrum:7.14 cerebellum:7.03 brain stem:6.69 corpus callosum/glia:6.39 pineal gland:- peripheral nerve:7.74 spine:6.54 retina:- eye:- artery/aorta:7.49 vein:6.93 lymphnode:7.71 peripheral blood:- spleen:7.85 thymus:7.10 bone marrow:6.31 adipose:7.87 bone:- skin:7.31
CAGE cerebrum:4.33 cerebellum:- brain stem:3.46 corpus callosum/glia:3.79 pineal gland:2.66 peripheral nerve:- spine:3.28 retina:- eye:- artery/aorta:4.68 vein:4.76 lymphnode:4.73 peripheral blood:- spleen:5.24 thymus:4.40 bone marrow:- adipose:4.83 bone:- skin:-
RNA-seq cerebrum:1.02 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.37 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.21 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:82 placenta:185.80 prostate:45.10 ovary:1304.20 testis:43.30 heart:12.80 muscle:20.10 esophagus:- stomach:- intestine:32.40 colon:84.80     liver/hepato:42.20        lung:112.40    bladder:- kidney:20.80 pituitary:116 thyroid/parathyroid:- adrenal gland:152.40 pancreas:44.50 breast:232.30 salivary:-
GeneChip uterus:7.82 placenta:7.07 prostate:7.22 ovary:7.84 testis:6.71 heart:7.20 muscle:6.09 esophagus:7.42 stomach:6.86 intestine:6.79 colon:6.58 liver/hepato:8.51 lung:8.48 bladder:- kidney:7.12 pituitary:7.01 thyroid/parathyroid:6.94 adrenal gland:8.16 pancreas:6.46 breast:8.15 salivary:7.06
CAGE uterus:4.84 placenta:5.62 prostate:4.52 ovary:5.14 testis:4.28 heart:4.38 muscle:3.40 esophagus:4.84 stomach:- intestine:3.55 colon:3.71     liver/hepato:6.10    lung:5.52 bladder:4.35 kidney:5.06 pituitary:3.33 thyroid/parathyroid:4.32 adrenal gland:- pancreas:3.92 breast:4.74 salivary:4.49
RNA-seq uterus:- placenta:- prostate:3.37 ovary:4.42 testis:4.17 heart:2.74 muscle:0.49 esophagus:- stomach:- intestine:- colon:3.32     liver/hepato:2.25        lung:5.26    bladder:- kidney:1.37 pituitary:- thyroid/parathyroid:3.34 adrenal gland:4.64 pancreas:- breast:3.85 salivary:-

Gene Information

IDs

Refseq ID NM_001127213
Gene ID 4061
Unigene ID Hs.521903
Probe set ID 202145_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000160932
GTEx ID ENSG00000160932

Orthologous Gene

Mouse[6]  NM_001164036, NM_001164037, NM_001164038, NM_001164039, NM_001164040, NM_008529
Rat [0]  

Chromosomal Region

8q24.3  [144,099,399  -  144,105,249]

Gene Family (Interpro ID)

IPR016054  Ly-6 antigen / uPA receptor -like

Link to Pubmed  (Pubmed ID)

8125298
8650192
8757598
9366413
9551972
9575182
11576217
11784869
12477932
12516096
15489334
16712791
18755862
18990604
19672991
20237496
21963094

Gene Ontology  (GO ID)

Biological Process

GO:0030325  adrenal gland development
GO:0007166  cell surface receptor linked signal transduction
GO:0048242  epinephrine secretion
GO:0001701  in utero embryonic development
GO:0042415  norepinephrine metabolic process
GO:0035265  organ growth
GO:0055010  ventricular cardiac muscle tissue morphogenesis

Cellular Component

GO:0031225  anchored to membrane
GO:0005887  integral to plasma membrane