class II, major histocompatibility complex, transactivator

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Synonym

MHC2TA, C2TA, MHC class II transactivator, CIITA IV, CIITA

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.39 cerebellum:4.67 brain stem:4.31 corpus callosum/glia:4.32 pineal gland:- peripheral nerve:4.17 spine:4.09 retina:- eye:- artery/aorta:4.35 vein:4.58 lymphnode:4.30 peripheral blood:- spleen:4.28 thymus:4.26 bone marrow:4.20 adipose:4.31 bone:- skin:4.53
CAGE cerebrum:1.76 cerebellum:- brain stem:2.76 corpus callosum/glia:3.31 pineal gland:1.14 peripheral nerve:- spine:3.08 retina:- eye:- artery/aorta:2.48 vein:4.85 lymphnode:4.43 peripheral blood:- spleen:4.22 thymus:3.12 bone marrow:- adipose:2.52 bone:- skin:-
RNA-seq cerebrum:0.32 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.57 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.75 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.13 placenta:4 prostate:4.03 ovary:4.16 testis:3.89 heart:4.26 muscle:4.50 esophagus:4.21 stomach:4.05 intestine:4.20 colon:4.30 liver/hepato:4.18 lung:4.15 bladder:- kidney:4.09 pituitary:4.25 thyroid/parathyroid:3.99 adrenal gland:4.14 pancreas:4.74 breast:4.10 salivary:4.49
CAGE uterus:2.15 placenta:1.25 prostate:2.27 ovary:1.53 testis:1.26 heart:1.75 muscle:1.59 esophagus:2.35 stomach:- intestine:1.50 colon:1.70     liver/hepato:1.01    lung:2.99 bladder:2.31 kidney:1.42 pituitary:1.27 thyroid/parathyroid:0.79 adrenal gland:- pancreas:0.94 breast:0.55 salivary:2.78
RNA-seq uterus:- placenta:- prostate:0.96 ovary:0.95 testis:0.50 heart:0.56 muscle:0.28 esophagus:- stomach:- intestine:- colon:0.22     liver/hepato:0.16        lung:1.97    bladder:- kidney:0.93 pituitary:- thyroid/parathyroid:0.35 adrenal gland:2.71 pancreas:- breast:0.99 salivary:-

IDs

Refseq ID NM_000246
Gene ID 4261
Unigene ID -
Probe set ID 211884_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000179583
GTEx ID ENSG00000179583

Orthologous Gene

Mouse[2]  NM_007575
Rat[1]  NM_053529

Chromosomal Region

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)