CDGSH iron sulfur domain 2

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Synonym

zinc finger, CDGSH-type domain 2, ZCD2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip nodata
CAGE cerebrum:3.24 cerebellum:- brain stem:3.50 corpus callosum/glia:3.21 pineal gland:3.58 peripheral nerve:- spine:3.31 retina:- eye:- artery/aorta:2.97 vein:2.87 lymphnode:3.04 peripheral blood:- spleen:3.48 thymus:3.18 bone marrow:- adipose:3.10 bone:- skin:-
RNA-seq cerebrum:3.23 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.97 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.11 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip nodata
CAGE uterus:2.83 placenta:3.12 prostate:3.09 ovary:3.08 testis:2.90 heart:3.07 muscle:2.31 esophagus:2.97 stomach:- intestine:3.44 colon:3.26     liver/hepato:4.41    lung:3.18 bladder:2.80 kidney:3.76 pituitary:3.17 thyroid/parathyroid:3.89 adrenal gland:- pancreas:4.14 breast:3.43 salivary:3.35
RNA-seq uterus:- placenta:- prostate:2.82 ovary:2.93 testis:2.64 heart:1.96 muscle:1.26 esophagus:- stomach:- intestine:- colon:2.83     liver/hepato:3.88        lung:2.27    bladder:- kidney:3.34 pituitary:- thyroid/parathyroid:2.80 adrenal gland:2.31 pancreas:- breast:2.23 salivary:-

Gene Information

IDs

Refseq ID NM_001008388
Gene ID 493856
Unigene ID -
Probe set ID -
Ensembl ID ENSG00000145354
GTEx ID ENSG00000145354

Orthologous Gene

Mouse[1]  NM_025902
Rat [0]  

Chromosomal Region

4q24  [103,790,135  -  103,810,399]

Gene Family (Interpro ID)

IPR018967  Iron sulphur-containing domain, CDGSH-type
IPR006622  Iron sulphur-containing domain, CDGSH-type, subfamily

Link to Pubmed  (Pubmed ID)

10739754
11076863
11230166
11256614
11317648
12477932
14724730
15489336
16344560
16381901
17376863
17584744
17846994
18029348
19322201
19580816
19946888
20010695
20649540
21139048
21832049
21890473
21963094
22412018
22779921
23959881
24159190
24250222
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0000422  mitochondrion degradation
GO:0010259  multicellular organismal aging
GO:0010506  regulation of autophagy

Cellular Component

GO:0005783  endoplasmic reticulum
GO:0005789  endoplasmic reticulum membrane
GO:0016021  integral to membrane
GO:0005741  mitochondrial outer membrane
GO:0043234  protein complex

Molecular Function

GO:0051537  2 iron, 2 sulfur cluster binding
GO:0046872  metal ion binding
GO:0005515  protein binding
GO:0042803  protein homodimerization activity