poly(A) binding protein, cytoplasmic 3

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Synonym

PABP3, Testis-specific poly(A)-binding protein, PABPC3, Poly(A)-binding protein 3, PABPL3, PABP 3, poly(A) binding protein, cytoplasmic 3, Polyadenylate-binding protein 3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:11.90 cerebellum:- brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:11.80 artery/aorta:89.90 vein:- lymphnode:40.40 peripheral blood:- spleen:- thymus:12.90 bone marrow:59 adipose:40.30 bone:25.60 skin:62.40
GeneChip cerebrum:8.67 cerebellum:8.58 brain stem:8.83 corpus callosum/glia:9.23 pineal gland:- peripheral nerve:9.39 spine:9.44 retina:- eye:- artery/aorta:9.91 vein:9.40 lymphnode:10.55 peripheral blood:- spleen:10.40 thymus:10.60 bone marrow:10.25 adipose:10.23 bone:- skin:10.34
CAGE cerebrum:0.26 cerebellum:- brain stem:0.24 corpus callosum/glia:0.29 pineal gland:0.51 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:2.96 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.33 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.74 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:14.60 prostate:22.50 ovary:186.30 testis:285.50 heart:12.80 muscle:- esophagus:- stomach:63.70 intestine:64.80 colon:50.90     liver/hepato:-        lung:-    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:269.50 salivary:-
GeneChip uterus:10.20 placenta:8.99 prostate:10.65 ovary:10.41 testis:11.49 heart:8.99 muscle:7.51 esophagus:10.88 stomach:10.16 intestine:9.51 colon:9.60 liver/hepato:9.69 lung:9.73 bladder:- kidney:9.42 pituitary:8.87 thyroid/parathyroid:9.89 adrenal gland:9.96 pancreas:9.74 breast:10.41 salivary:11.33
CAGE uterus:0 placenta:0.08 prostate:0 ovary:0 testis:4.30 heart:0 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0.09 kidney:0 pituitary:0.24 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0.55 salivary:0
RNA-seq uterus:- placenta:- prostate:6.06 ovary:5.75 testis:6.51 heart:3.18 muscle:3.34 esophagus:- stomach:- intestine:- colon:5.48     liver/hepato:3.50        lung:5.35    bladder:- kidney:3.79 pituitary:- thyroid/parathyroid:4.68 adrenal gland:5.22 pancreas:- breast:4.59 salivary:-

Gene Information

IDs

Refseq ID NM_030979
Gene ID 5042
Unigene ID Hs.458280
Probe set ID 208113_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000151846
GTEx ID ENSG00000151846

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

13q12.13  [25,670,300  -  25,673,389]

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1
IPR003954  RNA recognition, domain 1

Link to Pubmed  (Pubmed ID)

8432538
10358005
10543404
11230166
11328870
12477932
15489334
16201836
16226712
17267499
17620599
18029348
19460752
19956697
21832049
21890473
21906983
21963094
22505724
23000965
24244333
24550385
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0016071  mRNA metabolic process

Cellular Component

GO:0005737  cytoplasm

Molecular Function

GO:0000166  nucleotide binding
GO:0008143  poly(A) RNA binding