vacuolar protein sorting 36 homolog (S. cerevisiae)

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Synonym

DKFZp781E0871, C13orf9, Vacuolar protein sorting-associated protein 36, EAP45, CGI-145, vacuolar protein sorting 36 (yeast), ELL-associated protein of 45 kDa, VPS36, Eap45, chromosome 13 open reading frame 9

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:48.60 cerebellum:37.80 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:122.70 spine:- retina:- eye:52.90 artery/aorta:89.90 vein:- lymphnode:50.60 peripheral blood:18.20 spleen:56.70 thymus:38.70 bone marrow:39.40 adipose:- bone:12.80 skin:62.40
GeneChip nodata
CAGE cerebrum:3.52 cerebellum:- brain stem:3.67 corpus callosum/glia:3.29 pineal gland:3.78 peripheral nerve:- spine:3.36 retina:- eye:- artery/aorta:3.63 vein:3.32 lymphnode:3.46 peripheral blood:- spleen:3.45 thymus:3.37 bone marrow:- adipose:3.27 bone:- skin:-
RNA-seq cerebrum:3.58 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.29 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.02 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:76.50 prostate:45.10 ovary:- testis:30.30 heart:114.90 muscle:20.10 esophagus:- stomach:- intestine:64.80 colon:17     liver/hepato:84.40        lung:73.30    bladder:- kidney:72.80 pituitary:- thyroid/parathyroid:163.70 adrenal gland:- pancreas:44.50 breast:27.90 salivary:-
GeneChip nodata
CAGE uterus:3.71 placenta:3.41 prostate:3.59 ovary:3.21 testis:2.41 heart:3.58 muscle:3.55 esophagus:3.50 stomach:- intestine:3.96 colon:3.74     liver/hepato:3.15    lung:3.44 bladder:3.32 kidney:3.60 pituitary:3.50 thyroid/parathyroid:3.23 adrenal gland:- pancreas:3.20 breast:3.54 salivary:3.96
RNA-seq uterus:- placenta:- prostate:4.09 ovary:3.89 testis:2.80 heart:3.59 muscle:3.32 esophagus:- stomach:- intestine:- colon:3.52     liver/hepato:3.04        lung:2.96    bladder:- kidney:4.13 pituitary:- thyroid/parathyroid:3.91 adrenal gland:3.65 pancreas:- breast:3.76 salivary:-

Gene Information

IDs

Refseq ID NM_016075
Gene ID 51028
Unigene ID Hs.109520
Probe set ID -
Ensembl ID ENSG00000136100
GTEx ID ENSG00000136100

Orthologous Gene

Mouse[2]  NM_027338
Rat[1]  NM_001106092

Chromosomal Region

13q14.3  [52,986,839  -  53,024,763]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10810093
11031247
11278625
12477932
14505570
14519844
14702039
15057823
15218037
15489334
15755741
16344560
16371348
16973552
17010938
17057716
18539118
19056867
19322201
20682791
21139048
21145461
21543492
21890473
22863883
22939629

Gene Ontology  (GO ID)

Biological Process

GO:0016197  endosome transport
GO:0016044  membrane organization
GO:0015031  protein transport
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005829  cytosol
GO:0005768  endosome
GO:0005770  late endosome
GO:0005764  lysosome
GO:0016020  membrane
GO:0005634  nucleus

Molecular Function

GO:0032266  phosphatidylinositol 3-phosphate binding
GO:0043130  ubiquitin binding