C-type lectin domain family 1, member B

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Synonym

QDED721, C-type lectin domain family 1, member B, CLEC1B, CLEC2B, PRO1384, CLEC2, 1810061I13Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:4.49 cerebellum:4.40 brain stem:4.50 corpus callosum/glia:4.41 pineal gland:- peripheral nerve:4.40 spine:4.32 retina:- eye:- artery/aorta:4.52 vein:4.64 lymphnode:4.28 peripheral blood:- spleen:4.40 thymus:4.07 bone marrow:5.19 adipose:4.58 bone:- skin:4.58
CAGE cerebrum:0.08 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:1.34 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.05 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.28 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:4.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:4.90    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.39 placenta:4.44 prostate:4.27 ovary:4.34 testis:4.74 heart:4.55 muscle:4.53 esophagus:4.45 stomach:4.48 intestine:4.53 colon:4.57 liver/hepato:7.94 lung:4.38 bladder:- kidney:4.37 pituitary:4.51 thyroid/parathyroid:4.36 adrenal gland:4.45 pancreas:4.57 breast:4.40 salivary:4.54
CAGE uterus:0 placenta:0.16 prostate:0 ovary:0.14 testis:1.79 heart:0.20 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:3.59    lung:0.34 bladder:0 kidney:0.08 pituitary:0.19 thyroid/parathyroid:0.12 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0.17 heart:0.02 muscle:0 esophagus:- stomach:- intestine:- colon:0.26     liver/hepato:1.57        lung:0.45    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0.16 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_001099431
Gene ID 51266
Unigene ID Hs.409794
Probe set ID 220496_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000165682
GTEx ID ENSG00000165682

Orthologous Gene

Mouse[1]  NM_001204239, NM_001204253, NM_019985
Rat [0]  

Chromosomal Region

12p13.2  [10,138,241  -  10,166,023]

Gene Family (Interpro ID)

IPR001304  C-type lectin
IPR016187  C-type lectin fold
IPR016186  C-type lectin-like

Link to Pubmed  (Pubmed ID)

10671229
11745369
12477932
12975309
15489334
16174766
16189514
16511244
16541075
16940507
17132623
17616532
18215137
18583525
18707544
18955485
19483399
19785988
19824697
20154214
20154219
20237496
20482880
20549515
21714702
22556408
22682130
22736279
22740230
23053573
23264619
23341451

Gene Ontology  (GO ID)

Biological Process

GO:0007166  cell surface receptor linked signal transduction
GO:0006952  defense response

Cellular Component

GO:0005887  integral to plasma membrane

Molecular Function

GO:0030246  carbohydrate binding
GO:0005515  protein binding
GO:0004888  transmembrane receptor activity