sorting nexin 7

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Synonym

SNX7, MGC8717, DKFZP564F052, Sorting nexin-7, sorting nexin 7

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:112.30 retina:118.60 eye:11.80 artery/aorta:- vein:66.60 lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:6.18 cerebellum:4.50 brain stem:6.52 corpus callosum/glia:6.24 pineal gland:- peripheral nerve:7.60 spine:7.48 retina:- eye:- artery/aorta:6.99 vein:7.61 lymphnode:5.50 peripheral blood:- spleen:5.62 thymus:5.15 bone marrow:4.72 adipose:7.07 bone:- skin:7.17
CAGE cerebrum:2.48 cerebellum:- brain stem:2.70 corpus callosum/glia:2.69 pineal gland:2.28 peripheral nerve:- spine:3.34 retina:- eye:- artery/aorta:3.55 vein:2.27 lymphnode:2.22 peripheral blood:- spleen:2.30 thymus:1.29 bone marrow:- adipose:3.18 bone:- skin:-
RNA-seq cerebrum:2.51 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.71 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.81 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:123.90 prostate:- ovary:37.30 testis:30.30 heart:12.80 muscle:- esophagus:- stomach:- intestine:32.40 colon:25.40     liver/hepato:21.10        lung:24.40    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:9.30 salivary:-
GeneChip uterus:7.63 placenta:6.38 prostate:7.27 ovary:7.32 testis:7.36 heart:6.77 muscle:5.49 esophagus:6.91 stomach:6.70 intestine:6.87 colon:7.35 liver/hepato:5.84 lung:6.77 bladder:- kidney:7.28 pituitary:6.62 thyroid/parathyroid:6.97 adrenal gland:6.31 pancreas:6.69 breast:7.17 salivary:6.70
CAGE uterus:3.25 placenta:2.77 prostate:3.25 ovary:2.95 testis:3.25 heart:3.36 muscle:1.95 esophagus:3.23 stomach:- intestine:3.61 colon:3.64     liver/hepato:2.80    lung:2.78 bladder:3.23 kidney:3.37 pituitary:3.06 thyroid/parathyroid:2.89 adrenal gland:- pancreas:2.81 breast:3.49 salivary:2.80
RNA-seq uterus:- placenta:- prostate:4.13 ovary:3.76 testis:4.38 heart:2.88 muscle:1.45 esophagus:- stomach:- intestine:- colon:4.44     liver/hepato:2.39        lung:3.14    bladder:- kidney:4.37 pituitary:- thyroid/parathyroid:3.21 adrenal gland:3.20 pancreas:- breast:3.19 salivary:-

Gene Information

IDs

Refseq ID NM_015976
Gene ID 51375
Unigene ID Hs.197015
Probe set ID 205573_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000162627
GTEx ID ENSG00000162627

Orthologous Gene

Mouse[1]  NM_001190156, NM_029655
Rat[1]  NM_001012083, NM_029655

Chromosomal Region

1p21.3  [99,127,236  -  99,226,056]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
11485546
12461558
12477932
15489334
16130112
16189514
17474147
20203127
21873549
21900206
21988832
23259602
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0007154  cell communication
GO:0015031  protein transport

Cellular Component

GO:0030659  cytoplasmic vesicle membrane

Molecular Function

GO:0035091  phosphoinositide binding