chromatin modifying protein 5

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Synonym

chromosome 9 open reading frame 83, Vps60, PNAS-2, C9orf83, PNAS-114, HSPC177, Charged multivesicular body protein 5, Vacuolar protein sorting 60, SNF7DC2, chromatin modifying protein 5, CHMP5, SNF7 domain-containing protein 2, hVps60, CGI-34, Chromatin-modifying protein 5

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:4.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:118.60 eye:11.80 artery/aorta:- vein:- lymphnode:10.10 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:8.15 cerebellum:7.96 brain stem:8.28 corpus callosum/glia:8.06 pineal gland:- peripheral nerve:8.52 spine:8.36 retina:- eye:- artery/aorta:7.52 vein:7.47 lymphnode:7.70 peripheral blood:- spleen:8.05 thymus:8.45 bone marrow:7.40 adipose:8.07 bone:- skin:7.74
CAGE cerebrum:4.64 cerebellum:- brain stem:4.74 corpus callosum/glia:4.27 pineal gland:5.20 peripheral nerve:- spine:4.92 retina:- eye:- artery/aorta:3.99 vein:4.03 lymphnode:3.90 peripheral blood:- spleen:4.39 thymus:3.94 bone marrow:- adipose:4.20 bone:- skin:-
RNA-seq cerebrum:5.12 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.75 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.48 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:- prostate:11.30 ovary:- testis:4.30 heart:12.80 muscle:- esophagus:- stomach:- intestine:32.40 colon:-     liver/hepato:10.60        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:9.30 salivary:-
GeneChip uterus:8.26 placenta:8.61 prostate:8.96 ovary:8.39 testis:8.24 heart:7.97 muscle:7.31 esophagus:8.26 stomach:7.65 intestine:7.77 colon:7.53 liver/hepato:7.50 lung:8.18 bladder:- kidney:8.37 pituitary:8.12 thyroid/parathyroid:8.30 adrenal gland:8.02 pancreas:7.07 breast:7.75 salivary:7.60
CAGE uterus:3.83 placenta:4.83 prostate:4.46 ovary:4.07 testis:4.03 heart:4.35 muscle:3.98 esophagus:4.57 stomach:- intestine:4.82 colon:4.09     liver/hepato:4.23    lung:4.49 bladder:4.44 kidney:4.72 pituitary:4.64 thyroid/parathyroid:4.56 adrenal gland:- pancreas:3.65 breast:4.07 salivary:3.46
RNA-seq uterus:- placenta:- prostate:5.09 ovary:4.62 testis:5.08 heart:3.98 muscle:3.53 esophagus:- stomach:- intestine:- colon:5.23     liver/hepato:3.60        lung:5.46    bladder:- kidney:5.07 pituitary:- thyroid/parathyroid:4.86 adrenal gland:4.46 pancreas:- breast:4.82 salivary:-

Gene Information

IDs

Refseq ID NM_016410
Gene ID 51510
Unigene ID Hs.635313
Probe set ID 219356_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000086065
GTEx ID ENSG00000086065

Orthologous Gene

Mouse[1]  NM_029814
Rat[1]  NM_001025410

Chromosomal Region

9p13.3  [33,264,940  -  33,281,977]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10810093
11031247
11042152
11559748
12477932
14505569
14505570
14519844
15164053
15489334
15644320
16009940
16189514
16730941
17261583
17353931
17708794
17711858
17855796
18426649
19056867
20164219
20932654
21139048
21543490
21674799
21890473
21906983
21988832
22082156
22863883
22939629
23000965
23619569
24250222
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008333  endosome to lysosome transport
GO:0016197  endosome transport
GO:0007040  lysosome organization
GO:0016044  membrane organization
GO:0015031  protein transport
GO:0001919  regulation of receptor recycling
GO:0019067  viral assembly, maturation, egress, and release
GO:0016032  viral reproduction

Cellular Component

GO:0005829  cytosol
GO:0010008  endosome membrane
GO:0005634  nucleus

Molecular Function

GO:0005515  protein binding