LUC7-like 3 (S. cerevisiae)

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Synonym

LUC7A, CROP, OA48-18

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:158.80 cerebellum:239.30 brain stem:- corpus callosum/glia:262.50 pineal gland:445 peripheral nerve:245.40 spine:449.20 retina:593.20 eye:164.60 artery/aorta:- vein:266.60 lymphnode:212.30 peripheral blood:54.70 spleen:132.30 thymus:721.50 bone marrow:78.70 adipose:201.70 bone:76.80 skin:96
GeneChip cerebrum:9.59 cerebellum:10.12 brain stem:9.34 corpus callosum/glia:10.10 pineal gland:- peripheral nerve:9.51 spine:9.32 retina:- eye:- artery/aorta:9.77 vein:8.88 lymphnode:10.01 peripheral blood:- spleen:10.08 thymus:10.37 bone marrow:8.89 adipose:8.82 bone:- skin:8.67
CAGE cerebrum:5.05 cerebellum:- brain stem:5.15 corpus callosum/glia:4.27 pineal gland:5.42 peripheral nerve:- spine:5.53 retina:- eye:- artery/aorta:4.16 vein:4.41 lymphnode:3.74 peripheral blood:- spleen:4.23 thymus:4.30 bone marrow:- adipose:4.06 bone:- skin:-
RNA-seq cerebrum:4.11 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.82 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.63 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:246.10 placenta:94.70 prostate:90.10 ovary:74.50 testis:116.80 heart:255.40 muscle:100.50 esophagus:- stomach:106.20 intestine:226.80 colon:135.70     liver/hepato:580.50        lung:136.90    bladder:251.20 kidney:41.60 pituitary:463.90 thyroid/parathyroid:163.70 adrenal gland:253.90 pancreas:302.30 breast:232.30 salivary:-
GeneChip uterus:10.11 placenta:8.23 prostate:9.93 ovary:9.92 testis:8.78 heart:9.11 muscle:8.51 esophagus:9.41 stomach:9.80 intestine:8.22 colon:8.27 liver/hepato:9.53 lung:9.72 bladder:- kidney:8.68 pituitary:9.73 thyroid/parathyroid:9.68 adrenal gland:10.32 pancreas:6.97 breast:8.85 salivary:8.33
CAGE uterus:4.72 placenta:3.97 prostate:4.43 ovary:4.33 testis:3.80 heart:4.13 muscle:4.37 esophagus:4.02 stomach:- intestine:4.19 colon:3.96     liver/hepato:3.45    lung:4.31 bladder:4.54 kidney:4.11 pituitary:5.47 thyroid/parathyroid:4.20 adrenal gland:- pancreas:4.01 breast:4.01 salivary:3.30
RNA-seq uterus:- placenta:- prostate:4.46 ovary:5.61 testis:5.83 heart:2.46 muscle:3.34 esophagus:- stomach:- intestine:- colon:6.66     liver/hepato:3.12        lung:2.88    bladder:- kidney:4.74 pituitary:- thyroid/parathyroid:5.27 adrenal gland:4.29 pancreas:- breast:5.11 salivary:-

Gene Information

IDs

Refseq ID NM_006107
Gene ID 51747
Unigene ID Hs.130293
Probe set ID 208835_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000108848
GTEx ID ENSG00000108848

Orthologous Gene

Mouse[2]  NM_026313
Rat[1]  NM_001108291

Chromosomal Region

17q21.33  [48,796,905  -  48,834,076]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
10631324
10754390
11329013
12477932
12565863
14702039
14729963
15146197
15324660
15798186
16344560
16462885
16482509
17353931
17643375
17726058
18029348
18663000
19454010
19471022
19574390
19710015
20237496
20508642
20677014
21139048
21145461
21182205
21859973
21906983
22558309
22939629
22939879
22990118
23602568
24457600
24550385
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0008380  RNA splicing

Cellular Component

GO:0005925  focal adhesion
GO:0016607  nuclear speck
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005886  plasma membrane

Molecular Function

GO:0003677  DNA binding
GO:0003729  mRNA binding
GO:0005515  protein binding