chloride intracellular channel 5

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Synonym

FLJ90663, chloride intracellular channel 5, MST130, CLIC5, dJ447E21.4, MSTP130, Chloride intracellular channel protein 5, CLIC5B

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:15.40 cerebellum:- brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:30.70 spine:112.30 retina:118.60 eye:52.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:75.60 thymus:25.80 bone marrow:- adipose:121 bone:- skin:19.20
GeneChip cerebrum:5.76 cerebellum:5.72 brain stem:5.63 corpus callosum/glia:5.94 pineal gland:- peripheral nerve:6.81 spine:5.66 retina:- eye:- artery/aorta:6.55 vein:6.89 lymphnode:5.78 peripheral blood:- spleen:8.96 thymus:5.45 bone marrow:5.79 adipose:6.69 bone:- skin:5.90
CAGE cerebrum:1.20 cerebellum:- brain stem:0.90 corpus callosum/glia:1.23 pineal gland:0.49 peripheral nerve:- spine:0.60 retina:- eye:- artery/aorta:1.79 vein:2.73 lymphnode:1.76 peripheral blood:- spleen:4.16 thymus:0.96 bone marrow:- adipose:3.46 bone:- skin:-
RNA-seq cerebrum:0.30 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.93 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.34 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:167.60 prostate:- ovary:74.50 testis:21.60 heart:51.10 muscle:221 esophagus:- stomach:- intestine:64.80 colon:67.80     liver/hepato:10.60        lung:39.10    bladder:- kidney:228.70 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:9.30 salivary:-
GeneChip uterus:6.22 placenta:7.87 prostate:5.59 ovary:6.36 testis:5.18 heart:8.88 muscle:9.80 esophagus:6.49 stomach:5.72 intestine:6.68 colon:7.10 liver/hepato:5.42 lung:9.37 bladder:- kidney:8.37 pituitary:6.24 thyroid/parathyroid:6.39 adrenal gland:6.07 pancreas:5.82 breast:5.96 salivary:5.39
CAGE uterus:2.22 placenta:4.42 prostate:1.78 ovary:1.62 testis:0.72 heart:5.12 muscle:5.64 esophagus:2.35 stomach:- intestine:5.20 colon:3.59     liver/hepato:0.36    lung:4.89 bladder:1.68 kidney:4.21 pituitary:1.27 thyroid/parathyroid:3.00 adrenal gland:- pancreas:1.42 breast:2.11 salivary:1.00
RNA-seq uterus:- placenta:- prostate:1.73 ovary:1.06 testis:1.34 heart:5.87 muscle:5.14 esophagus:- stomach:- intestine:- colon:1.19     liver/hepato:0        lung:4.01    bladder:- kidney:4.07 pituitary:- thyroid/parathyroid:3.91 adrenal gland:1.90 pancreas:- breast:2.45 salivary:-

Gene Information

IDs

Refseq ID NM_016929
Gene ID 53405
Unigene ID Hs.485489
Probe set ID 219866_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000112782
GTEx ID ENSG00000112782

Orthologous Gene

Mouse[1]  NM_172621
Rat[1]  NM_053603

Chromosomal Region

6p21.1  [45,848,750  -  46,048,132]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
8889548
10793131
12163479
12200217
12477932
14574404
14702039
15184393
15342556
15489334
16303743
16344560
17021174
17492382
18028448
18676988
19056867
19738201
20055760
20335315
20379614
20946665
22699663
23326517
23602568

Gene Ontology  (GO ID)

Biological Process

GO:0060088  auditory receptor cell stereocilium organization
GO:0006821  chloride transport
GO:0002024  diet induced thermogenesis
GO:0007565  female pregnancy
GO:0050885  neuromuscular process controlling balance
GO:0008104  protein localization
GO:0007605  sensory perception of sound
GO:0006810  transport

Cellular Component

GO:0015629  actin cytoskeleton
GO:0005938  cell cortex
GO:0034707  chloride channel complex
GO:0005794  Golgi apparatus
GO:0005815  microtubule organizing center
GO:0032420  stereocilium

Molecular Function

GO:0005515  protein binding
GO:0005247  voltage-gated chloride channel activity