polymerase (RNA) II (DNA directed) polypeptide E, 25kDa

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Synonym

POLR2E, RPABC1, hsRPB5, RPB25, hRPB25, RPB5, DNA-directed RNA polymerase II 23 kDa polypeptide

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:86.50

cerebellum:50.40

brain stem:-

corpus callosum/glia:87.50

pineal gland:296.70

peripheral nerve:-

spine:-

retina:-

eye:217.40

artery/aorta:30

vein:66.60

lymphnode:70.80

peripheral blood:109.30

spleen:132.30

thymus:64.40

bone marrow:19.70

adipose:484

bone:115.20

skin:57.60

GeneChip

cerebrum:7.61

cerebellum:7.22

brain stem:7.80

corpus callosum/glia:7.42

pineal gland:-

peripheral nerve:8.15

spine:7.73

retina:-

eye:-

artery/aorta:7.97

vein:7.69

lymphnode:7.94

peripheral blood:-

spleen:7.61

thymus:7.98

bone marrow:7.33

adipose:8.40

bone:-

skin:8.10

CAGE

cerebrum:3.76

cerebellum:-

brain stem:3.93

corpus callosum/glia:3.64

pineal gland:3.52

peripheral nerve:-

spine:3.30

retina:-

eye:-

artery/aorta:3.79

vein:3.88

lymphnode:3.88

peripheral blood:-

spleen:3.81

thymus:3.97

bone marrow:-

adipose:4.15

bone:-

skin:-

RNA-seq

cerebrum:3.69

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.30

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:4.74

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:109.40

placenta:25.50

prostate:78.90

ovary:37.30

testis:51.90

heart:89.40

muscle:180.80

esophagus:-

stomach:21.20

intestine:64.80

colon:135.70

liver/hepato:31.70

lung:136.90

bladder:376.80

kidney:156

pituitary:116

thyroid/parathyroid:-

adrenal gland:-

pancreas:213.40

breast:250.90

salivary:-

GeneChip

uterus:7.60

placenta:7.16

prostate:7.74

ovary:7.56

testis:8.35

heart:7.39

muscle:7.36

esophagus:8.13

stomach:7.43

intestine:7.53

colon:7.35

liver/hepato:7.87

lung:7.71

bladder:-

kidney:7.70

pituitary:6.81

thyroid/parathyroid:7.92

adrenal gland:7.39

pancreas:7

breast:7.98

salivary:7.65

CAGE

uterus:3.54

placenta:3.86

prostate:4.00

ovary:3.78

testis:4.20

heart:3.68

muscle:3.71

esophagus:4.10

stomach:-

intestine:3.97

colon:3.81

liver/hepato:4.51

lung:3.80

bladder:3.75

kidney:3.94

pituitary:2.63

thyroid/parathyroid:4.03

adrenal gland:-

pancreas:3.69

breast:4.07

salivary:3.56

RNA-seq

uterus:-

placenta:-

prostate:4.55

ovary:4.27

testis:4.34

heart:3.20

muscle:3.96

esophagus:-

stomach:-

intestine:-

colon:4.23

liver/hepato:4.04

lung:3.96

bladder:-

kidney:4.16

pituitary:-

thyroid/parathyroid:4.58

adrenal gland:4.48

pancreas:-

breast:5.19

salivary:-

IDs

Refseq ID	NM_002695
Gene ID	5434
Unigene ID	Hs.24301
Probe set ID	217854_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000099817
GTEx ID	ENSG00000099817

Orthologous Gene

Mouse[1]	NM_025554
Rat[1]	NM_001109614

Chromosomal Region

19p13.3 [1,086,578 - 1,095,391]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0006281	DNA repair
GO:0010467	gene expression
GO:0045087	innate immune response
GO:0006370	mRNA capping
GO:0000398	nuclear mRNA splicing, via spliceosome
GO:0006289	nucleotide-excision repair
GO:0032481	positive regulation of type I interferon production
GO:0050434	positive regulation of viral transcription
GO:0006368	RNA elongation from RNA polymerase II promoter
GO:0006385	RNA elongation from RNA polymerase III promoter
GO:0008380	RNA splicing
GO:0006386	termination of RNA polymerase III transcription
GO:0006366	transcription from RNA polymerase II promoter
GO:0006383	transcription from RNA polymerase III promoter
GO:0006367	transcription initiation from RNA polymerase II promoter
GO:0006283	transcription-coupled nucleotide-excision repair
GO:0016032	viral reproduction
GO:0019048	virus-host interaction

Cellular Component

GO:0005829	cytosol
GO:0005665	DNA-directed RNA polymerase II, core complex
GO:0005654	nucleoplasm
GO:0005634	nucleus

Molecular Function

GO:0003677	DNA binding
GO:0003899	DNA-directed RNA polymerase activity
GO:0005515	protein binding

polymerase (RNA) II (DNA directed) polypeptide E, 25kDa

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function