Smith-Magenis syndrome chromosome region, candidate 7-like

 jump to detail

Synonym

HSU79252, FLJ20232, dJ1104E15.3, SMCR7L

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.84 cerebellum:6.92 brain stem:6.76 corpus callosum/glia:6.61 pineal gland:- peripheral nerve:7.08 spine:6.75 retina:- eye:- artery/aorta:6.50 vein:6.06 lymphnode:6.61 peripheral blood:- spleen:6.71 thymus:6.59 bone marrow:6.52 adipose:6.71 bone:- skin:6.60
CAGE cerebrum:2.87 cerebellum:- brain stem:2.61 corpus callosum/glia:2.75 pineal gland:2.73 peripheral nerve:- spine:2.63 retina:- eye:- artery/aorta:2.38 vein:2.78 lymphnode:2.88 peripheral blood:- spleen:3.07 thymus:2.81 bone marrow:- adipose:2.94 bone:- skin:-
RNA-seq cerebrum:3.12 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.16 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.98 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:6.49 placenta:6.49 prostate:6.64 ovary:6.61 testis:6.69 heart:6.30 muscle:6.50 esophagus:6.59 stomach:6.43 intestine:6.45 colon:6.63 liver/hepato:7.13 lung:6.23 bladder:- kidney:7.03 pituitary:6.52 thyroid/parathyroid:6.74 adrenal gland:6.66 pancreas:6.17 breast:6.66 salivary:6.74
CAGE uterus:2.58 placenta:2.67 prostate:2.28 ovary:2.59 testis:3.81 heart:2.70 muscle:2.64 esophagus:2.44 stomach:- intestine:3.00 colon:3.14     liver/hepato:3.28    lung:2.45 bladder:2.28 kidney:2.93 pituitary:2.41 thyroid/parathyroid:2.63 adrenal gland:- pancreas:2.66 breast:2.34 salivary:2.88
RNA-seq uterus:- placenta:- prostate:2.56 ovary:3.30 testis:3.32 heart:2.26 muscle:1.80 esophagus:- stomach:- intestine:- colon:2.45     liver/hepato:3.24        lung:2.10    bladder:- kidney:3.28 pituitary:- thyroid/parathyroid:3.17 adrenal gland:3.38 pancreas:- breast:3.12 salivary:-

Gene Information

IDs

Refseq ID NM_019008
Gene ID 54471
Unigene ID -
Probe set ID 204594_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000100335
GTEx ID ENSG00000100335

Orthologous Gene

Mouse[1]  NM_178719
Rat[1]  NM_001007709

Chromosomal Region

22q13.1  [39,895,437  -  39,914,137]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8619474
9110174
10591208
11076863
11230166
11256614
12477932
15324660
15489336
16189514
16381901
20877624
21139048
21508961
21701560
23283981
23880462
23921378
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0008053  mitochondrial fusion

Cellular Component

GO:0016021  integral to membrane
GO:0005741  mitochondrial outer membrane
GO:0005739  mitochondrion

Molecular Function

GO:0005515  protein binding