POU class 2 homeobox 1

Synonym

OCT1, OTF1, OTF-1, NF-A1, POU domain, class 2, transcription factor 1, POU2F1, Octamer-binding transcription factor 1, Oct-1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:60.40

cerebellum:50.40

brain stem:-

corpus callosum/glia:29.20

pineal gland:296.70

peripheral nerve:61.30

spine:-

retina:237.30

eye:52.90

artery/aorta:60

vein:-

lymphnode:60.70

peripheral blood:18.20

spleen:151.30

thymus:219

bone marrow:39.40

adipose:-

bone:25.60

skin:38.40

GeneChip

cerebrum:6.27

cerebellum:6.71

brain stem:5.94

corpus callosum/glia:6.57

pineal gland:-

peripheral nerve:6.47

spine:6.29

retina:-

eye:-

artery/aorta:6.76

vein:6.42

lymphnode:6.84

peripheral blood:-

spleen:6.99

thymus:6.69

bone marrow:6.44

adipose:6.40

bone:-

skin:6.31

CAGE

cerebrum:3.08

cerebellum:-

brain stem:2.90

corpus callosum/glia:3.09

pineal gland:3.17

peripheral nerve:-

spine:2.85

retina:-

eye:-

artery/aorta:2.96

vein:2.59

lymphnode:2.71

peripheral blood:-

spleen:3.01

thymus:2.67

bone marrow:-

adipose:2.63

bone:-

skin:-

RNA-seq

cerebrum:0.19

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.37

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:1.12

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:82

placenta:58.30

prostate:22.50

ovary:-

testis:43.30

heart:12.80

muscle:20.10

esophagus:-

stomach:21.20

intestine:32.40

colon:84.80

liver/hepato:116.10

lung:48.90

bladder:-

kidney:41.60

pituitary:-

thyroid/parathyroid:327.50

adrenal gland:50.80

pancreas:35.60

breast:65.10

salivary:-

GeneChip

uterus:6.52

placenta:6.35

prostate:6.58

ovary:6.46

testis:6.95

heart:6.05

muscle:5.91

esophagus:6.51

stomach:6.39

intestine:6.01

colon:6.26

liver/hepato:6.12

lung:6.18

bladder:-

kidney:6.18

pituitary:6.88

thyroid/parathyroid:6.64

adrenal gland:6.42

pancreas:5.65

breast:6.77

salivary:5.94

CAGE

uterus:2.44

placenta:2.99

prostate:2.35

ovary:2.48

testis:2.41

heart:2.00

muscle:2.78

esophagus:2.46

stomach:-

intestine:2.18

colon:2.33

liver/hepato:1.86

lung:2.58

bladder:2.83

kidney:2.22

pituitary:2.78

thyroid/parathyroid:2.23

adrenal gland:-

pancreas:1.87

breast:2.02

salivary:1.82

RNA-seq

uterus:-

placenta:-

prostate:0.72

ovary:1.41

testis:1.40

heart:0.04

muscle:0.00

esophagus:-

stomach:-

intestine:-

colon:0.89

liver/hepato:0.00

lung:0.44

bladder:-

kidney:0.57

pituitary:-

thyroid/parathyroid:0.73

adrenal gland:0.00

pancreas:-

breast:0.38

salivary:-

IDs

Refseq ID	NM_002697
Gene ID	5451
Unigene ID	Hs.493649
Probe set ID	206789_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000143190
GTEx ID	ENSG00000143190

Orthologous Gene

Mouse[8]	NM_011137, NM_198932, NM_198933, NM_198934
Rat [0]

Chromosomal Region

1q24.1 [167,190,120 - 167,396,582]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001356	Homeobox
IPR009057	Homeodomain-like
IPR012287	Homeodomain-related

Gene Ontology (GO ID)

Biological Process

GO:0010467	gene expression
GO:0045892	negative regulation of transcription, DNA-dependent
GO:0006383	transcription from RNA polymerase III promoter

Cellular Component

GO:0005654	nucleoplasm
GO:0005634	nucleus

Molecular Function

GO:0005515	protein binding
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity

POU class 2 homeobox 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function