aprataxin

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Synonym

aprataxin, MGC1072, AOA, EOAHA, FLJ20157, Aprataxin, AOA1, AXA1, EAOH, APTX, FHA-HIT

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:45

cerebellum:63

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:-

spine:112.30

retina:-

eye:52.90

artery/aorta:30

vein:-

lymphnode:50.60

peripheral blood:91.10

spleen:37.80

thymus:51.50

bone marrow:39.40

adipose:40.30

bone:38.40

skin:81.60

GeneChip

cerebrum:6.61

cerebellum:6.57

brain stem:6.64

corpus callosum/glia:6.71

pineal gland:-

peripheral nerve:6.93

spine:6.65

retina:-

eye:-

artery/aorta:6.39

vein:6.10

lymphnode:6.44

peripheral blood:-

spleen:6.57

thymus:6.71

bone marrow:6.31

adipose:6.32

bone:-

skin:6.28

CAGE

cerebrum:3.37

cerebellum:-

brain stem:3.45

corpus callosum/glia:3.48

pineal gland:3.36

peripheral nerve:-

spine:3.52

retina:-

eye:-

artery/aorta:3.03

vein:2.93

lymphnode:2.81

peripheral blood:-

spleen:2.74

thymus:2.81

bone marrow:-

adipose:2.90

bone:-

skin:-

RNA-seq

cerebrum:0.26

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.19

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.00

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:54.70

placenta:69.20

prostate:22.50

ovary:37.30

testis:112.50

heart:51.10

muscle:20.10

esophagus:-

stomach:-

intestine:-

colon:25.40

liver/hepato:84.40

lung:63.50

bladder:125.60

kidney:41.60

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:35.60

breast:27.90

salivary:-

GeneChip

uterus:6.67

placenta:6.23

prostate:6.91

ovary:6.77

testis:6.87

heart:6.07

muscle:5.74

esophagus:6.65

stomach:6.62

intestine:6.31

colon:6.57

liver/hepato:6.77

lung:6.53

bladder:-

kidney:6.82

pituitary:6.65

thyroid/parathyroid:6.57

adrenal gland:6.97

pancreas:6.27

breast:6.68

salivary:6.24

CAGE

uterus:3.06

placenta:2.81

prostate:3.20

ovary:2.68

testis:3.34

heart:2.77

muscle:2.81

esophagus:2.96

stomach:-

intestine:2.85

colon:2.69

liver/hepato:2.79

lung:3.18

bladder:2.81

kidney:3.03

pituitary:3.50

thyroid/parathyroid:3.02

adrenal gland:-

pancreas:3.54

breast:2.64

salivary:3.11

RNA-seq

uterus:-

placenta:-

prostate:0.39

ovary:0.52

testis:0.60

heart:0.21

muscle:0.00

esophagus:-

stomach:-

intestine:-

colon:0.59

liver/hepato:0.06

lung:0.00

bladder:-

kidney:1.34

pituitary:-

thyroid/parathyroid:0.30

adrenal gland:0.00

pancreas:-

breast:0.35

salivary:-

IDs

Refseq ID	NM_175073
Gene ID	54840
Unigene ID	Hs.20158
Probe set ID	218527_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000137074
GTEx ID	ENSG00000137074

Orthologous Gene

Mouse[2]	NM_001025444, NM_025545
Rat[1]	NM_148889, NM_025545

Chromosomal Region

9p21.1 [32,972,604 - 33,025,166]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0008219	cell death
GO:0006266	DNA ligation
GO:0006302	double-strand break repair
GO:0031647	regulation of protein stability
GO:0006974	response to DNA damage stimulus
GO:0042542	response to hydrogen peroxide
GO:0000012	single strand break repair

Cellular Component

GO:0000785	chromatin
GO:0005737	cytoplasm
GO:0000790	nuclear chromatin
GO:0005730	nucleolus
GO:0005654	nucleoplasm

Molecular Function

GO:0003682	chromatin binding
GO:0003684	damaged DNA binding
GO:0033699	DNA 5'-adenosine monophosphate hydrolase activity
GO:0003690	double-stranded DNA binding
GO:0003725	double-stranded RNA binding
GO:0046872	metal ion binding
GO:0008967	phosphoglycolate phosphatase activity
GO:0051219	phosphoprotein binding
GO:0046403	polynucleotide 3'-phosphatase activity
GO:0005515	protein binding
GO:0047485	protein N-terminus binding

aprataxin

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function