regulation of nuclear pre-mRNA domain containing 1A

 jump to detail

Synonym

FLJ10656, MGC19513, P15RS

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:207.40 cerebellum:75.60 brain stem:- corpus callosum/glia:175 pineal gland:- peripheral nerve:61.30 spine:449.20 retina:474.60 eye:94 artery/aorta:89.90 vein:- lymphnode:50.60 peripheral blood:18.20 spleen:56.70 thymus:167.50 bone marrow:19.70 adipose:40.30 bone:38.40 skin:100.80
GeneChip cerebrum:6.13 cerebellum:5.63 brain stem:6.36 corpus callosum/glia:5.71 pineal gland:- peripheral nerve:5.54 spine:6.26 retina:- eye:- artery/aorta:4.96 vein:4.80 lymphnode:4.82 peripheral blood:- spleen:4.70 thymus:5.90 bone marrow:4.81 adipose:4.86 bone:- skin:5
CAGE cerebrum:4.70 cerebellum:- brain stem:4.59 corpus callosum/glia:4.48 pineal gland:4.93 peripheral nerve:- spine:4.61 retina:- eye:- artery/aorta:3.94 vein:3.57 lymphnode:3.32 peripheral blood:- spleen:3.71 thymus:3.52 bone marrow:- adipose:3.70 bone:- skin:-
RNA-seq cerebrum:4.96 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.82 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.08 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:100.20 placenta:43.70 prostate:90.10 ovary:37.30 testis:116.80 heart:114.90 muscle:20.10 esophagus:- stomach:42.50 intestine:97.20 colon:42.40     liver/hepato:95        lung:88    bladder:502.40 kidney:93.60 pituitary:232 thyroid/parathyroid:- adrenal gland:304.70 pancreas:35.60 breast:204.40 salivary:656.80
GeneChip uterus:5.49 placenta:4.90 prostate:6.63 ovary:5.53 testis:5.60 heart:5.52 muscle:5.83 esophagus:5.08 stomach:4.97 intestine:5.68 colon:4.73 liver/hepato:4.65 lung:4.49 bladder:- kidney:5.31 pituitary:6.17 thyroid/parathyroid:5.25 adrenal gland:5.73 pancreas:5.28 breast:5.05 salivary:5.55
CAGE uterus:3.94 placenta:3.58 prostate:4.20 ovary:3.87 testis:4.17 heart:4.21 muscle:4.30 esophagus:4.12 stomach:- intestine:3.67 colon:3.54     liver/hepato:3.68    lung:3.77 bladder:4.37 kidney:3.85 pituitary:4.60 thyroid/parathyroid:3.95 adrenal gland:- pancreas:3.71 breast:4.05 salivary:3.81
RNA-seq uterus:- placenta:- prostate:4.67 ovary:3.93 testis:4.18 heart:3.93 muscle:3.78 esophagus:- stomach:- intestine:- colon:4.72     liver/hepato:2.81        lung:3.41    bladder:- kidney:3.94 pituitary:- thyroid/parathyroid:3.93 adrenal gland:3.42 pancreas:- breast:4.11 salivary:-

Gene Information

IDs

Refseq ID NM_018170
Gene ID 55197
Unigene ID Hs.464912
Probe set ID 218209_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000141425
GTEx ID ENSG00000141425

Orthologous Gene

Mouse[2]  NM_144861
Rat[2]  NM_144861

Chromosomal Region

18q12.2  [33,569,787  -  33,647,539]

Gene Family (Interpro ID)

IPR006569  RNA polymerase II, large subunit, CTD

Link to Pubmed  (Pubmed ID)

12470661
12477932
14702039
19322201
19471022
20739273
21139048
21988832
22053931
22118674
22231121
22580456
22863883
22990118
23455924
24223155
24550385

Gene Ontology  (GO ID)

Biological Process

GO:0070940  dephosphorylation of RNA polymerase II C-terminal domain

Cellular Component

GO:0016591  DNA-directed RNA polymerase II, holoenzyme