lysosomal protein transmembrane 4 beta

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Synonym

lysosomal associated protein transmembrane 4 beta, PSEC0001, Lysosomal-associated transmembrane protein 4B, LAPTM4B, LC27, Lysosome-associated transmembrane protein 4-beta, LAPTM4beta

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:152.90 cerebellum:88.20 brain stem:- corpus callosum/glia:87.50 pineal gland:1335.10 peripheral nerve:245.40 spine:- retina:- eye:270.30 artery/aorta:60 vein:266.60 lymphnode:20.20 peripheral blood:36.40 spleen:75.60 thymus:25.80 bone marrow:19.70 adipose:121 bone:64 skin:168
GeneChip cerebrum:8.91 cerebellum:7.98 brain stem:9.36 corpus callosum/glia:8.93 pineal gland:- peripheral nerve:9.07 spine:10.01 retina:- eye:- artery/aorta:8.72 vein:9.30 lymphnode:8.20 peripheral blood:- spleen:9.16 thymus:6.40 bone marrow:6.22 adipose:8.31 bone:- skin:9.17
CAGE cerebrum:3.59 cerebellum:- brain stem:3.98 corpus callosum/glia:4.26 pineal gland:5.58 peripheral nerve:- spine:3.89 retina:- eye:- artery/aorta:3.63 vein:3.05 lymphnode:3.44 peripheral blood:- spleen:4.19 thymus:2.23 bone marrow:- adipose:3.78 bone:- skin:-
RNA-seq cerebrum:5.02 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.13 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.67 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:136.70 placenta:65.60 prostate:56.30 ovary:- testis:216.30 heart:510.90 muscle:140.60 esophagus:- stomach:233.70 intestine:32.40 colon:144.20     liver/hepato:52.80        lung:117.30    bladder:125.60 kidney:166.40 pituitary:- thyroid/parathyroid:327.50 adrenal gland:101.60 pancreas:106.70 breast:65.10 salivary:328.40
GeneChip uterus:9.76 placenta:7 prostate:8.60 ovary:10.18 testis:10.36 heart:10.31 muscle:10.84 esophagus:8.81 stomach:8.81 intestine:9.57 colon:8.70 liver/hepato:7.63 lung:8.38 bladder:- kidney:9.58 pituitary:8.62 thyroid/parathyroid:8.93 adrenal gland:9.38 pancreas:9.31 breast:9.13 salivary:9.76
CAGE uterus:4.29 placenta:2.85 prostate:3.97 ovary:4.45 testis:4.89 heart:4.95 muscle:4.47 esophagus:3.80 stomach:- intestine:4.89 colon:3.63     liver/hepato:3.58    lung:3.92 bladder:4.10 kidney:4.67 pituitary:3.58 thyroid/parathyroid:4.03 adrenal gland:- pancreas:4.42 breast:3.56 salivary:4.72
RNA-seq uterus:- placenta:- prostate:5.62 ovary:6.01 testis:5.64 heart:6.50 muscle:5.28 esophagus:- stomach:- intestine:- colon:4.90     liver/hepato:3.08        lung:5.30    bladder:- kidney:6.20 pituitary:- thyroid/parathyroid:5.31 adrenal gland:5.85 pancreas:- breast:4.67 salivary:-

Gene Information

IDs

Refseq ID NM_018407
Gene ID 55353
Unigene ID Hs.492314
Probe set ID 214039_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000104341
GTEx ID ENSG00000104341

Orthologous Gene

Mouse[3]  NM_033521
Rat [0]  

Chromosomal Region

8q22.1  [98,787,285  -  98,865,241]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11076863
11230166
12477932
12640618
12902989
15162524
15489334
15489336
15911104
15968325
16303743
16381901
16769693
17074969
17965115
18334282
18949404
19690886
19843073
20358632
20379614
20583413
20711237
20881850
21139048
21416470
21429547
21618708
21656743
22037872
22096579
22156622
22193644
22207410
22270081
22302286
22412199
22509374
22578410
22971479
22984585
22984631
23023342
23292099
23312008
23345117
23364988
23469012

Gene Ontology  (GO ID)

Biological Process

GO:0006810  transport

Cellular Component

GO:0012505  endomembrane system
GO:0016021  integral to membrane

Molecular Function

GO:0005515  protein binding