serglycin

Synonym

PPG, Platelet proteoglycan core protein, Serglycin, Hematopoetic proteoglycan core protein, SERGLYCIN, PRG, proteoglycan 1, secretory granule, FLJ12930, MGC9289, P.PG

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:1.20

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:6.49

cerebellum:5.90

brain stem:6.96

corpus callosum/glia:7.44

pineal gland:-

peripheral nerve:8.04

spine:8.15

retina:-

eye:-

artery/aorta:7.97

vein:8.08

lymphnode:9

peripheral blood:-

spleen:10.10

thymus:9.41

bone marrow:12.64

adipose:8.67

bone:-

skin:7.38

CAGE

cerebrum:4.56

cerebellum:-

brain stem:4.93

corpus callosum/glia:4.58

pineal gland:4.88

peripheral nerve:-

spine:6.04

retina:-

eye:-

artery/aorta:5.38

vein:5.58

lymphnode:6.16

peripheral blood:-

spleen:7.07

thymus:5.40

bone marrow:-

adipose:6.20

bone:-

skin:-

RNA-seq

cerebrum:5.93

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:8.29

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:8.45

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:11.30

ovary:-

testis:4.30

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:197.50

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:7.70

placenta:7.61

prostate:7.62

ovary:7.16

testis:5.90

heart:8.46

muscle:6.06

esophagus:7.11

stomach:8.48

intestine:8.08

colon:8.62

liver/hepato:7.75

lung:10.04

bladder:-

kidney:7.06

pituitary:5.99

thyroid/parathyroid:7.70

adrenal gland:7.54

pancreas:7.41

breast:7.26

salivary:6.39

CAGE

uterus:4.55

placenta:5.26

prostate:4.88

ovary:4.75

testis:4.20

heart:5.36

muscle:4.47

esophagus:4.86

stomach:-

intestine:5.01

colon:4.22

liver/hepato:5.22

lung:6.55

bladder:6.07

kidney:5.58

pituitary:4.89

thyroid/parathyroid:4.91

adrenal gland:-

pancreas:3.63

breast:5.58

salivary:3.86

RNA-seq

uterus:-

placenta:-

prostate:6.76

ovary:5.19

testis:5.58

heart:5.80

muscle:4.38

esophagus:-

stomach:-

intestine:-

colon:7.52

liver/hepato:5.76

lung:9.99

bladder:-

kidney:7.20

pituitary:-

thyroid/parathyroid:5.61

adrenal gland:7.26

pancreas:-

breast:6.07

salivary:-

IDs

Refseq ID	NM_002727
Gene ID	5552
Unigene ID	Hs.190877
Probe set ID	201858_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000122862
GTEx ID	ENSG00000122862

Orthologous Gene

Mouse[1]	NM_011157
Rat [0]

Chromosomal Region

10q22.1 [70,847,862 - 70,864,567]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0031214	biomineral formation
GO:0007596	blood coagulation
GO:0008626	induction of apoptosis by granzyme
GO:0033382	maintenance of granzyme B location in T cell secretory granule
GO:0033373	maintenance of protease location in mast cell secretory granule
GO:0033364	mast cell secretory granule organization
GO:0030502	negative regulation of bone mineralization
GO:0050710	negative regulation of cytokine secretion
GO:0030168	platelet activation
GO:0002576	platelet degranulation
GO:0016485	protein processing
GO:0033371	T cell secretory granule organization

Cellular Component

GO:0005576	extracellular region
GO:0005615	extracellular space
GO:0005794	Golgi apparatus
GO:0042629	mast cell granule
GO:0031093	platelet alpha granule lumen
GO:0042588	zymogen granule

Molecular Function

GO:0005518	collagen binding
GO:0005515	protein binding

serglycin

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function