family with sequence similarity 48, member A

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Synonym

bA421P11.4, family with sequence similarity 48, member A, p38IP, chromosome 13 open reading frame 19, FP757, C13, Protein FAM48A, P38IP, p38-interacting protein, C13orf19, FAM48A

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:62.80 cerebellum:75.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:61.30 spine:112.30 retina:- eye:70.50 artery/aorta:60 vein:- lymphnode:101.10 peripheral blood:36.40 spleen:132.30 thymus:116 bone marrow:98.40 adipose:- bone:64 skin:52.80
GeneChip cerebrum:5.62 cerebellum:6.13 brain stem:5.68 corpus callosum/glia:6.01 pineal gland:- peripheral nerve:5.80 spine:5.60 retina:- eye:- artery/aorta:6.09 vein:5.75 lymphnode:6.48 peripheral blood:- spleen:6.65 thymus:7.14 bone marrow:6.19 adipose:6.04 bone:- skin:5.78
CAGE cerebrum:3.35 cerebellum:- brain stem:3.44 corpus callosum/glia:3.31 pineal gland:4.02 peripheral nerve:- spine:3.73 retina:- eye:- artery/aorta:3.30 vein:3.25 lymphnode:3.42 peripheral blood:- spleen:3.45 thymus:3.72 bone marrow:- adipose:3.03 bone:- skin:-
RNA-seq cerebrum:0.50 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.63 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.16 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:63.80 placenta:83.80 prostate:67.60 ovary:149.10 testis:367.70 heart:38.30 muscle:20.10 esophagus:- stomach:148.70 intestine:97.20 colon:50.90     liver/hepato:10.60        lung:68.40    bladder:125.60 kidney:62.40 pituitary:116 thyroid/parathyroid:- adrenal gland:101.60 pancreas:53.30 breast:46.50 salivary:-
GeneChip uterus:6.71 placenta:5.94 prostate:6.50 ovary:6.71 testis:8.18 heart:5.83 muscle:5.66 esophagus:6.09 stomach:6.15 intestine:5.90 colon:5.67 liver/hepato:5.86 lung:6.17 bladder:- kidney:5.98 pituitary:6.24 thyroid/parathyroid:6.37 adrenal gland:6.17 pancreas:5.48 breast:6.18 salivary:5.98
CAGE uterus:3.55 placenta:3.33 prostate:3.31 ovary:3.40 testis:4.35 heart:3.28 muscle:2.78 esophagus:3.12 stomach:- intestine:3.30 colon:3.21     liver/hepato:2.52    lung:3.56 bladder:3.17 kidney:3.17 pituitary:4.00 thyroid/parathyroid:3.20 adrenal gland:- pancreas:3.06 breast:3.58 salivary:3.13
RNA-seq uterus:- placenta:- prostate:3.13 ovary:2.56 testis:3.42 heart:0.71 muscle:0.95 esophagus:- stomach:- intestine:- colon:2.24     liver/hepato:1.08        lung:2.70    bladder:- kidney:2.94 pituitary:- thyroid/parathyroid:2.25 adrenal gland:2.12 pancreas:- breast:1.92 salivary:-

Gene Information

IDs

Refseq ID NM_017569
Gene ID 55578
Unigene ID Hs.435815
Probe set ID 221774_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000102710
GTEx ID ENSG00000102710

Orthologous Gene

Mouse[1]  NM_019995
Rat[1]  NM_001014170

Chromosomal Region

13q13.3  [37,583,449  -  37,633,850]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
11340631
12070015
12477932
14702039
15057823
15489334
15498874
15978328
16344560
16685401
16713569
16751104
17643375
18838386
19114550
19615732
19893488
20936779
21988832
24163370
24220028

Gene Ontology  (GO ID)

Biological Process

GO:0006914  autophagy
GO:0007369  gastrulation

Cellular Component

GO:0000124  SAGA complex
GO:0070461  SAGA-type complex

Molecular Function

GO:0005515  protein binding
GO:0003712  transcription cofactor activity