LIM and senescent cell antigen-like domains 2

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Synonym

PINCH-2, LIM and senescent cell antigen-like domains 2, FLJ10044, LIMS2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:33.20 cerebellum:12.60 brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:276 spine:224.60 retina:- eye:29.40 artery/aorta:60 vein:66.60 lymphnode:30.30 peripheral blood:18.20 spleen:151.30 thymus:77.30 bone marrow:- adipose:121 bone:102.40 skin:14.40
GeneChip nodata
CAGE cerebrum:2.78 cerebellum:- brain stem:2.97 corpus callosum/glia:2.97 pineal gland:2.82 peripheral nerve:- spine:2.96 retina:- eye:- artery/aorta:5.71 vein:4.04 lymphnode:3.03 peripheral blood:- spleen:3.98 thymus:3.77 bone marrow:- adipose:3.97 bone:- skin:-
RNA-seq cerebrum:1.53 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.35 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.36 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:191.40 placenta:32.80 prostate:101.40 ovary:37.30 testis:13 heart:114.90 muscle:- esophagus:685.60 stomach:106.20 intestine:194.40 colon:169.60     liver/hepato:73.90        lung:73.30    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:101.60 pancreas:35.60 breast:111.50 salivary:-
GeneChip nodata
CAGE uterus:5.11 placenta:3.16 prostate:4.78 ovary:3.44 testis:3.17 heart:4.79 muscle:3.41 esophagus:4.69 stomach:- intestine:3.72 colon:4.82     liver/hepato:2.82    lung:4.41 bladder:5.46 kidney:3.34 pituitary:1.82 thyroid/parathyroid:2.73 adrenal gland:- pancreas:2.18 breast:4.32 salivary:2.75
RNA-seq uterus:- placenta:- prostate:4.66 ovary:1.79 testis:3.28 heart:2.39 muscle:0.65 esophagus:- stomach:- intestine:- colon:5.63     liver/hepato:1.44        lung:1.87    bladder:- kidney:1.26 pituitary:- thyroid/parathyroid:1.29 adrenal gland:3.93 pancreas:- breast:3.30 salivary:-

Gene Information

IDs

Refseq ID NR_027823
Gene ID 55679
Unigene ID Hs.469881
Probe set ID -
Ensembl ID -
GTEx ID -

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

2q14.3  [128,395,956  -  128,439,360]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11331308
12167643
12477932
14702039
15231748
15342556
15489334
16344560
16959213
20237496
20500520
21832049
23455922
23535033

Gene Ontology  (GO ID)

Biological Process

GO:0034329  cell junction assembly
GO:0016337  cell-cell adhesion
GO:0045216  cell-cell junction organization

Cellular Component

GO:0005829  cytosol
GO:0005925  focal adhesion
GO:0005634  nucleus
GO:0005886  plasma membrane

Molecular Function

GO:0008270  zinc ion binding