ataxin 7-like 3

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Synonym

ataxin 7-like 3, ATXN7L3, DKFZp761G2113

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:58.10 cerebellum:12.60 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:61.30 spine:- retina:- eye:29.40 artery/aorta:- vein:133.30 lymphnode:40.40 peripheral blood:91.10 spleen:56.70 thymus:154.60 bone marrow:39.40 adipose:40.30 bone:38.40 skin:38.40
GeneChip nodata
CAGE cerebrum:1.78 cerebellum:- brain stem:1.92 corpus callosum/glia:1.56 pineal gland:1.70 peripheral nerve:- spine:1.64 retina:- eye:- artery/aorta:1.79 vein:1.80 lymphnode:1.74 peripheral blood:- spleen:1.86 thymus:1.65 bone marrow:- adipose:1.16 bone:- skin:-
RNA-seq cerebrum:3.43 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.64 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.14 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:63.80 placenta:43.70 prostate:11.30 ovary:74.50 testis:60.60 heart:127.70 muscle:- esophagus:- stomach:- intestine:- colon:8.50     liver/hepato:-        lung:19.60    bladder:- kidney:- pituitary:- thyroid/parathyroid:327.50 adrenal gland:- pancreas:- breast:74.30 salivary:-
GeneChip nodata
CAGE uterus:1.87 placenta:2.05 prostate:1.49 ovary:1.56 testis:1.87 heart:1.70 muscle:1.46 esophagus:1.54 stomach:- intestine:1.58 colon:1.84     liver/hepato:1.63    lung:1.71 bladder:1.30 kidney:1.64 pituitary:1.49 thyroid/parathyroid:1.57 adrenal gland:- pancreas:1.21 breast:0.90 salivary:1.58
RNA-seq uterus:- placenta:- prostate:0.84 ovary:1.41 testis:1.30 heart:1.36 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:1.78        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:1.14 adrenal gland:0.62 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_020218
Gene ID 56970
Unigene ID Hs.512651
Probe set ID -
Ensembl ID ENSG00000087152
GTEx ID ENSG00000087152

Orthologous Gene

Mouse[2]  NM_001098836, NM_001098837
Rat[2]  NM_001098836, NM_001098837

Chromosomal Region

17q21.31  [42,269,174  -  42,277,453]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
15115762
15489334
16713569
16751776
18206972
19615732
19843541
20634802
21746879
23382074

Gene Ontology  (GO ID)

Biological Process

GO:0016578  histone deubiquitination
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0000124  SAGA complex

Molecular Function

GO:0030374  ligand-dependent nuclear receptor transcription coactivator activity
GO:0046872  metal ion binding
GO:0005515  protein binding
GO:0003713  transcription coactivator activity