valyl-tRNA synthetase 2, mitochondrial (putative)

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Synonym

DKFZP434L1435, valyl-tRNA synthetase like, Em:AB023048.4, valyl-tRNA synthetase 2-like, VARS2L, MGC138259, MGC142165, VARSL, KIAA1885

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:43.90 cerebellum:113.30 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:23.50 artery/aorta:30 vein:- lymphnode:20.20 peripheral blood:- spleen:56.70 thymus:38.70 bone marrow:- adipose:- bone:- skin:28.80
GeneChip nodata
CAGE cerebrum:2.04 cerebellum:- brain stem:1.84 corpus callosum/glia:2.15 pineal gland:1.80 peripheral nerve:- spine:1.83 retina:- eye:- artery/aorta:1.82 vein:2.33 lymphnode:2.14 peripheral blood:- spleen:2.05 thymus:2.36 bone marrow:- adipose:1.60 bone:- skin:-
RNA-seq cerebrum:0.83 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.40 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.64 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:3.60 prostate:33.80 ovary:- testis:47.60 heart:- muscle:20.10 esophagus:- stomach:- intestine:64.80 colon:8.50     liver/hepato:52.80        lung:53.80    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip nodata
CAGE uterus:1.42 placenta:1.66 prostate:1.51 ovary:1.48 testis:1.49 heart:1.65 muscle:1.99 esophagus:2.05 stomach:- intestine:1.93 colon:2.16     liver/hepato:2.27    lung:1.64 bladder:1.15 kidney:2.03 pituitary:1.25 thyroid/parathyroid:2.01 adrenal gland:- pancreas:2.26 breast:1.80 salivary:1.58
RNA-seq uterus:- placenta:- prostate:0.70 ovary:1.00 testis:0.25 heart:0.99 muscle:1.56 esophagus:- stomach:- intestine:- colon:0.38     liver/hepato:1.66        lung:0.87    bladder:- kidney:0.52 pituitary:- thyroid/parathyroid:0.90 adrenal gland:0.79 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_020442
Gene ID 57176
Unigene ID Hs.597526
Probe set ID -
Ensembl ID ENSG00000137411
GTEx ID ENSG00000137411

Orthologous Gene

Mouse[1]  NM_175137
Rat[1]  NM_213563

Chromosomal Region

6p21.33  [30,876,019  -  30,894,236]
HSCHR6_MHC_MANN  [30,920,701  -  30,938,920]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1898367
11572484
12477932
14702039
18400783
18624398
19851445
20041166
20186120
20503108
20848476
20877624
21890473
21906983
23449627
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0006418  tRNA aminoacylation for protein translation
GO:0006438  valyl-tRNA aminoacylation

Cellular Component

GO:0005739  mitochondrion

Molecular Function

GO:0005524  ATP binding
GO:0004832  valine-tRNA ligase activity