TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)

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Synonym

TRMT5, MGC111453, TRM5, KIAA1393

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:8.30 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:19.70 adipose:40.30 bone:- skin:33.60
GeneChip cerebrum:8.51 cerebellum:8.57 brain stem:8.60 corpus callosum/glia:8.92 pineal gland:- peripheral nerve:8.64 spine:8.84 retina:- eye:- artery/aorta:8.81 vein:8.71 lymphnode:9.44 peripheral blood:- spleen:9.21 thymus:11.20 bone marrow:10.57 adipose:9.02 bone:- skin:9.10
CAGE cerebrum:2.31 cerebellum:- brain stem:2.11 corpus callosum/glia:2.07 pineal gland:2.18 peripheral nerve:- spine:2.20 retina:- eye:- artery/aorta:1.88 vein:2.54 lymphnode:1.86 peripheral blood:- spleen:2.36 thymus:2.54 bone marrow:- adipose:2.91 bone:- skin:-
RNA-seq cerebrum:1.71 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.80 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.07 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:10.90 prostate:22.50 ovary:37.30 testis:43.30 heart:25.50 muscle:- esophagus:- stomach:21.20 intestine:- colon:-     liver/hepato:-        lung:9.80    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:9.65 placenta:9.03 prostate:9.85 ovary:9.80 testis:9.14 heart:8.54 muscle:8.57 esophagus:8.98 stomach:9.06 intestine:9.26 colon:9.66 liver/hepato:8.17 lung:9.10 bladder:- kidney:8.95 pituitary:9.71 thyroid/parathyroid:9.80 adrenal gland:8.82 pancreas:9.03 breast:9.31 salivary:9.15
CAGE uterus:2.73 placenta:2.52 prostate:2.64 ovary:2.97 testis:3.01 heart:2.14 muscle:2.85 esophagus:2.58 stomach:- intestine:2.24 colon:1.95     liver/hepato:2.60    lung:2.18 bladder:2.77 kidney:2.69 pituitary:2.64 thyroid/parathyroid:2.44 adrenal gland:- pancreas:2.26 breast:2.27 salivary:2.50
RNA-seq uterus:- placenta:- prostate:2.25 ovary:3.22 testis:3.28 heart:1.25 muscle:1.46 esophagus:- stomach:- intestine:- colon:2.21     liver/hepato:1.45        lung:1.38    bladder:- kidney:2.42 pituitary:- thyroid/parathyroid:2.27 adrenal gland:2.03 pancreas:- breast:2.53 salivary:-

Gene Information

IDs

Refseq ID NM_020810
Gene ID 57570
Unigene ID Hs.380159
Probe set ID 221952_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000126814
GTEx ID ENSG00000126814

Orthologous Gene

Mouse[1]  NM_029580
Rat[1]  NM_001108713

Chromosomal Region

14q23.1  [61,438,169  -  61,448,076]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10718198
12477932
15248782
15489334
18029348
18187620
21139048
21906983
23887145
24816145

Gene Ontology  (GO ID)

Cellular Component

GO:0005759  mitochondrial matrix
GO:0005634  nucleus