protocadherin 10

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Synonym

OL-PCDH, PCDH10, MGC133344, KIAA1400, DKFZP761O2023, Protocadherin-10 precursor, protocadherin 10, PCDH19

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:73.50 cerebellum:12.60 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:35.30 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:9.60
GeneChip nodata
CAGE cerebrum:4.86 cerebellum:- brain stem:4.74 corpus callosum/glia:5.38 pineal gland:4.84 peripheral nerve:- spine:4.46 retina:- eye:- artery/aorta:4.00 vein:1.69 lymphnode:0.22 peripheral blood:- spleen:0 thymus:2.79 bone marrow:- adipose:0.71 bone:- skin:-
RNA-seq cerebrum:1.87 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.20 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:14.60 prostate:- ovary:- testis:17.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip nodata
CAGE uterus:2.80 placenta:3.67 prostate:3.87 ovary:2.00 testis:2.81 heart:1.76 muscle:0.66 esophagus:1.54 stomach:- intestine:0.77 colon:1.09     liver/hepato:0.26    lung:1.40 bladder:2.51 kidney:2.81 pituitary:2.45 thyroid/parathyroid:1.25 adrenal gland:- pancreas:0 breast:0.55 salivary:1.28
RNA-seq uterus:- placenta:- prostate:0.38 ovary:0.06 testis:0.03 heart:0.04 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.04     liver/hepato:0.01        lung:0.32    bladder:- kidney:0.08 pituitary:- thyroid/parathyroid:0.15 adrenal gland:0.11 pancreas:- breast:0.01 salivary:-

Gene Information

IDs

Refseq ID NM_020815
Gene ID 57575
Unigene ID Hs.192859
Probe set ID -
Ensembl ID ENSG00000138650
GTEx ID ENSG00000138650

Orthologous Gene

Mouse[8]  NM_001098170, NM_001098171, NM_001098172, NM_011043
Rat[8]  NM_001098170, NM_001098171, NM_001098172, NM_011043

Chromosomal Region

4q28.3  [134,070,470  -  134,129,356]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like

Link to Pubmed  (Pubmed ID)

8012384
10380929
10716726
10718198
10817752
10835267
11230163
11549318
12477932
16247458
18621663
18644894
19084528
19262141
19681120
19709077
20353276
20379614
21237250
21314642
21597995
21960365
22206871
22245948
22543497
23171734
23180019
23260144
23321168
23321465
23569128
23839493
23929756
24406169
24722188

Gene Ontology  (GO ID)

Biological Process

GO:0007156  homophilic cell adhesion

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005509  calcium ion binding