Scm-like with four mbt domains 2

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Synonym

Scm-related gene containing four mbt domains 2, KIAA1617, SFMBT2, Scm-like with four mbt domains 2, Scm-like with four MBT domains protein 2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:20.10 cerebellum:37.80 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:118.60 eye:29.40 artery/aorta:- vein:- lymphnode:40.40 peripheral blood:- spleen:56.70 thymus:12.90 bone marrow:98.40 adipose:- bone:25.60 skin:28.80
GeneChip nodata
CAGE cerebrum:0.61 cerebellum:- brain stem:1.60 corpus callosum/glia:2.23 pineal gland:0.26 peripheral nerve:- spine:0.88 retina:- eye:- artery/aorta:0.34 vein:0.59 lymphnode:0.09 peripheral blood:- spleen:0.17 thymus:0.28 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:14.60 prostate:- ovary:- testis:13 heart:12.80 muscle:- esophagus:- stomach:21.20 intestine:- colon:-     liver/hepato:31.70        lung:14.70    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:92.90 salivary:-
GeneChip nodata
CAGE uterus:0.26 placenta:0.30 prostate:0.33 ovary:0.14 testis:0.19 heart:0.31 muscle:0.13 esophagus:0.33 stomach:- intestine:0.21 colon:0.21     liver/hepato:0    lung:0.59 bladder:0 kidney:0.33 pituitary:0.42 thyroid/parathyroid:0 adrenal gland:- pancreas:0.58 breast:0 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.36 testis:0.00 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.11        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.00 adrenal gland:0.10 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_001029880
Gene ID 57713
Unigene ID Hs.407983
Probe set ID -
Ensembl ID ENSG00000198879
GTEx ID ENSG00000198879

Orthologous Gene

Mouse[1]  NM_001198808, NM_001198809, NM_177386
Rat[1]  NM_001107364, NM_001198809, NM_177386

Chromosomal Region

10p14  [7,200,586  -  7,453,450]

Gene Family (Interpro ID)

IPR001660  Sterile alpha motif
IPR010993  Sterile alpha motif homology
IPR013761  Sterile alpha motif-type

Link to Pubmed  (Pubmed ID)

10997877
12477932
14702039
15164054
16344560
22581228
23385818
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0006355  regulation of transcription, DNA-dependent

Cellular Component

GO:0005634  nucleus