pentraxin-related gene, rapidly induced by IL-1 beta

Synonym

TSG14, Pentaxin-related protein PTX3, TSG-14, rapidly induced by IL-1 beta, Tumor necrosis factor-inducible protein TSG-14, Pentraxin-related protein PTX3 precursor, TNFAIP5, PTX3

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:8.30

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:30.70

spine:-

retina:-

eye:11.80

artery/aorta:119.90

vein:66.60

lymphnode:-

peripheral blood:-

spleen:18.90

thymus:-

bone marrow:216.50

adipose:-

bone:166.30

skin:28.80

GeneChip

cerebrum:2.78

cerebellum:3.32

brain stem:3.12

corpus callosum/glia:2.71

pineal gland:-

peripheral nerve:3.38

spine:2.90

retina:-

eye:-

artery/aorta:5.29

vein:4.43

lymphnode:2.88

peripheral blood:-

spleen:7.06

thymus:3.16

bone marrow:7.45

adipose:3.85

bone:-

skin:4.11

CAGE

cerebrum:0.27

cerebellum:-

brain stem:0.44

corpus callosum/glia:0.39

pineal gland:1.37

peripheral nerve:-

spine:0.63

retina:-

eye:-

artery/aorta:2.83

vein:0.70

lymphnode:1.63

peripheral blood:-

spleen:2.40

thymus:0.33

bone marrow:-

adipose:3.31

bone:-

skin:-

RNA-seq

cerebrum:0.86

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.57

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:6.68

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:58.30

prostate:-

ovary:-

testis:-

heart:51.10

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:21.10

lung:78.20

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:17.80

breast:-

salivary:-

GeneChip

uterus:3.14

placenta:4.36

prostate:3.13

ovary:3.52

testis:2.69

heart:4.64

muscle:2.78

esophagus:2.79

stomach:3.60

intestine:3.30

colon:3.44

liver/hepato:2.73

lung:6.08

bladder:-

kidney:2.69

pituitary:2.81

thyroid/parathyroid:3.28

adrenal gland:2.92

pancreas:4.25

breast:3.96

salivary:2.84

CAGE

uterus:0.64

placenta:1.17

prostate:1.85

ovary:2.68

testis:0.71

heart:2.98

muscle:2.72

esophagus:1.60

stomach:-

intestine:0.57

colon:2.23

liver/hepato:0.46

lung:2.17

bladder:5.06

kidney:1.93

pituitary:1.50

thyroid/parathyroid:1.79

adrenal gland:-

pancreas:1.98

breast:4.32

salivary:0.62

RNA-seq

uterus:-

placenta:-

prostate:3.05

ovary:0.73

testis:0.91

heart:1.48

muscle:0.58

esophagus:-

stomach:-

intestine:-

colon:5.75

liver/hepato:0.91

lung:4.56

bladder:-

kidney:2.65

pituitary:-

thyroid/parathyroid:1.97

adrenal gland:2.03

pancreas:-

breast:1.03

salivary:-

IDs

Refseq ID	NM_002852
Gene ID	5806
Unigene ID	Hs.591286
Probe set ID	206157_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000163661
GTEx ID	ENSG00000163661

Orthologous Gene

Mouse[2]	NM_008987
Rat [0]

Chromosomal Region

3q25.32 [157,154,578 - 157,161,417]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0006954	inflammatory response
GO:0008228	opsonization
GO:0045429	positive regulation of nitric oxide biosynthetic process
GO:0050766	positive regulation of phagocytosis
GO:0001878	response to yeast