chromosome 19 open reading frame 29

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Synonym

Uncharacterized protein C19orf29, NY-REN-24, NY-REN-24 antigen, C19orf29, chromosome 19 open reading frame 29

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:16.60 cerebellum:50.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:23.50 artery/aorta:- vein:66.60 lymphnode:60.70 peripheral blood:- spleen:- thymus:25.80 bone marrow:- adipose:- bone:12.80 skin:-
GeneChip cerebrum:6.24 cerebellum:6.45 brain stem:6.12 corpus callosum/glia:6.31 pineal gland:- peripheral nerve:6.13 spine:6.18 retina:- eye:- artery/aorta:6.43 vein:6.14 lymphnode:6.65 peripheral blood:- spleen:6.56 thymus:6.38 bone marrow:6.28 adipose:6.38 bone:- skin:6.26
CAGE cerebrum:2.84 cerebellum:- brain stem:2.62 corpus callosum/glia:2.73 pineal gland:2.40 peripheral nerve:- spine:2.38 retina:- eye:- artery/aorta:2.46 vein:3.11 lymphnode:2.57 peripheral blood:- spleen:2.23 thymus:2.62 bone marrow:- adipose:2.35 bone:- skin:-
RNA-seq cerebrum:1.26 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.18 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.66 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:- prostate:- ovary:37.30 testis:21.60 heart:38.30 muscle:- esophagus:- stomach:- intestine:- colon:8.50     liver/hepato:-        lung:34.20    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:163.70 adrenal gland:- pancreas:35.60 breast:- salivary:-
GeneChip uterus:6.11 placenta:6.29 prostate:6.11 ovary:6.07 testis:6.81 heart:6 muscle:6.05 esophagus:6.25 stomach:6.34 intestine:6.15 colon:6.40 liver/hepato:6.28 lung:6.30 bladder:- kidney:6.23 pituitary:6.26 thyroid/parathyroid:6.28 adrenal gland:6.31 pancreas:5.82 breast:6.32 salivary:6.37
CAGE uterus:2.76 placenta:2.39 prostate:2.73 ovary:2.83 testis:2.98 heart:2.46 muscle:2.98 esophagus:2.50 stomach:- intestine:2.27 colon:2.42     liver/hepato:2.31    lung:2.47 bladder:2.61 kidney:2.51 pituitary:2.20 thyroid/parathyroid:2.53 adrenal gland:- pancreas:2.48 breast:2.99 salivary:2.63
RNA-seq uterus:- placenta:- prostate:1.91 ovary:2.37 testis:1.97 heart:0.98 muscle:1.47 esophagus:- stomach:- intestine:- colon:1.71     liver/hepato:1.22        lung:1.33    bladder:- kidney:1.66 pituitary:- thyroid/parathyroid:2.14 adrenal gland:2.41 pancreas:- breast:1.52 salivary:-

Gene Information

IDs

Refseq ID NM_001080543
Gene ID 58509
Unigene ID Hs.128425
Probe set ID 213815_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000105298
GTEx ID ENSG00000105298

Orthologous Gene

Mouse[1]  NM_027381
Rat[1]  NM_001081447

Chromosomal Region

19p13.3  [3,610,626  -  3,626,813]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8619474
9110174
10508479
11991638
12477932
14667819
15057824
15146197
15197164
15302935
15489334
17353931
19913121
20628086
20829348
21429463
23251661
24163370
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0071347  cellular response to interleukin-1
GO:0071222  cellular response to lipopolysaccharide
GO:0071356  cellular response to tumor necrosis factor
GO:0045087  innate immune response
GO:0007275  multicellular organismal development
GO:0032688  negative regulation of interferon-beta production
GO:0032717  negative regulation of interleukin-8 production
GO:0031665  negative regulation of lipopolysaccharide-mediated signaling pathway
GO:0032088  negative regulation of NF-kappaB transcription factor activity
GO:0001933  negative regulation of protein amino acid phosphorylation
GO:0034122  negative regulation of toll-like receptor signaling pathway
GO:0032720  negative regulation of tumor necrosis factor production
GO:0060339  negative regulation of type I interferon-mediated signaling pathway
GO:0000398  nuclear mRNA splicing, via spliceosome

Cellular Component

GO:0071013  catalytic step 2 spliceosome
GO:0005634  nucleus

Molecular Function

GO:0005515  protein binding