RAD23 homolog B (S. cerevisiae)

Synonym

HHR23B, hHR23B, RAD23B, UV excision repair protein RAD23 homolog B, XP-C repair-complementing complex 58 kDa protein, HR23B, RAD23 homolog B (S. cerevisiae), RAD23 (S. cerevisiae) homolog B

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:66.40

cerebellum:-

brain stem:-

corpus callosum/glia:175

pineal gland:148.30

peripheral nerve:61.30

spine:112.30

retina:118.60

eye:88.20

artery/aorta:149.90

vein:133.30

lymphnode:60.70

peripheral blood:91.10

spleen:-

thymus:64.40

bone marrow:137.80

adipose:121

bone:166.30

skin:134.40

GeneChip

cerebrum:7.33

cerebellum:7.71

brain stem:7.42

corpus callosum/glia:6.64

pineal gland:-

peripheral nerve:7.71

spine:7.13

retina:-

eye:-

artery/aorta:7.40

vein:7.52

lymphnode:7

peripheral blood:-

spleen:7

thymus:7.36

bone marrow:6.91

adipose:7.75

bone:-

skin:7.81

CAGE

cerebrum:4.97

cerebellum:-

brain stem:4.94

corpus callosum/glia:4.77

pineal gland:4.85

peripheral nerve:-

spine:4.73

retina:-

eye:-

artery/aorta:4.73

vein:5.04

lymphnode:4.95

peripheral blood:-

spleen:5.19

thymus:5.12

bone marrow:-

adipose:5.55

bone:-

skin:-

RNA-seq

cerebrum:2.35

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.48

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.49

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:127.60

placenta:196.70

prostate:56.30

ovary:149.10

testis:138.40

heart:114.90

muscle:180.80

esophagus:-

stomach:21.20

intestine:97.20

colon:161.10

liver/hepato:147.80

lung:503.40

bladder:-

kidney:83.20

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:62.20

breast:83.60

salivary:-

GeneChip

uterus:7.80

placenta:8.25

prostate:7.87

ovary:7.88

testis:7.11

heart:7.55

muscle:8.40

esophagus:7.81

stomach:7.16

intestine:7.73

colon:7.15

liver/hepato:8.07

lung:7.30

bladder:-

kidney:7.12

pituitary:7.14

thyroid/parathyroid:7.22

adrenal gland:7.32

pancreas:7.63

breast:7.78

salivary:7.16

CAGE

uterus:5.15

placenta:5.90

prostate:5.32

ovary:5.26

testis:5.07

heart:5.23

muscle:5.75

esophagus:5.54

stomach:-

intestine:5.15

colon:4.97

liver/hepato:6.01

lung:5.12

bladder:5.55

kidney:5.16

pituitary:5.12

thyroid/parathyroid:5.16

adrenal gland:-

pancreas:5.52

breast:5.21

salivary:4.87

RNA-seq

uterus:-

placenta:-

prostate:4.42

ovary:2.57

testis:2.27

heart:3.55

muscle:4.99

esophagus:-

stomach:-

intestine:-

colon:3.25

liver/hepato:3.98

lung:4.46

bladder:-

kidney:3.59

pituitary:-

thyroid/parathyroid:3.57

adrenal gland:2.20

pancreas:-

breast:3.90

salivary:-

IDs

Refseq ID	NM_002874
Gene ID	5887
Unigene ID	Hs.521640
Probe set ID	201223_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000119318
GTEx ID	ENSG00000119318

Orthologous Gene

Mouse[2]	NM_009011
Rat[1]	NM_001025275

Chromosomal Region

9q31.2 [110,045,418 - 110,094,475]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000626	Ubiquitin
IPR019955	Ubiquitin supergroup
IPR000449	Ubiquitin-associated/translation elongation factor EF1B, N-terminal
IPR015940	Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote

GO:0006281	DNA repair
GO:0006289	nucleotide-excision repair
GO:0000715	nucleotide-excision repair, DNA damage recognition
GO:0000718	nucleotide-excision repair, DNA damage removal
GO:0043161	proteasomal ubiquitin-dependent protein catabolic process
GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283	spermatogenesis

GO:0005737	cytoplasm
GO:0005730	nucleolus
GO:0005654	nucleoplasm
GO:0005634	nucleus
GO:0000502	proteasome complex

GO:0003684	damaged DNA binding
GO:0031593	polyubiquitin binding
GO:0005515	protein binding
GO:0003697	single-stranded DNA binding

RAD23 homolog B (S. cerevisiae)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function