retinoic acid receptor, gamma

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Synonym

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Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:2.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:40.30 bone:- skin:-
GeneChip cerebrum:5.38 cerebellum:5.46 brain stem:5.40 corpus callosum/glia:5.19 pineal gland:- peripheral nerve:5.36 spine:5.30 retina:- eye:- artery/aorta:5.43 vein:5.56 lymphnode:5.37 peripheral blood:- spleen:5.03 thymus:4.84 bone marrow:5.36 adipose:5.60 bone:- skin:5.62
CAGE cerebrum:1.25 cerebellum:- brain stem:1.14 corpus callosum/glia:1.17 pineal gland:1.27 peripheral nerve:- spine:0.65 retina:- eye:- artery/aorta:3.02 vein:2.69 lymphnode:2.92 peripheral blood:- spleen:1.93 thymus:1.24 bone marrow:- adipose:1.93 bone:- skin:-
RNA-seq cerebrum:0.09 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.87 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.83 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:22.50 ovary:- testis:26 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.60        lung:29.30    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:5.33 placenta:5.10 prostate:5.19 ovary:5.18 testis:5.06 heart:5.56 muscle:5.82 esophagus:5.90 stomach:5.42 intestine:5.56 colon:5.76 liver/hepato:5.40 lung:5.29 bladder:- kidney:5.38 pituitary:5.32 thyroid/parathyroid:4.99 adrenal gland:5.39 pancreas:5.45 breast:5.01 salivary:5.42
CAGE uterus:3.39 placenta:1.92 prostate:2.82 ovary:2.82 testis:1.74 heart:2.09 muscle:0.66 esophagus:4.23 stomach:- intestine:1.17 colon:2.23     liver/hepato:1.12    lung:2.38 bladder:2.72 kidney:1.67 pituitary:0.87 thyroid/parathyroid:2.12 adrenal gland:- pancreas:1.42 breast:2.91 salivary:2.22
RNA-seq uterus:- placenta:- prostate:1.75 ovary:2.22 testis:1.04 heart:0.12 muscle:0.00 esophagus:- stomach:- intestine:- colon:1.24     liver/hepato:0.20        lung:1.16    bladder:- kidney:0.37 pituitary:- thyroid/parathyroid:1.74 adrenal gland:0.59 pancreas:- breast:0.92 salivary:-

Gene Ontology  (GO ID)

Biological Process

GO:0009952  anterior/posterior pattern formation
GO:0071300  cellular response to retinoic acid
GO:0048048  embryonic eye morphogenesis
GO:0035116  embryonic hindlimb morphogenesis
GO:0010467  gene expression
GO:0003430  growth plate cartilage chondrocyte growth
GO:0070384  Harderian gland development
GO:0035264  multicellular organism growth
GO:0008285  negative regulation of cell proliferation
GO:0032331  negative regulation of chondrocyte differentiation
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0043065  positive regulation of apoptosis
GO:0008284  positive regulation of cell proliferation
GO:0043068  positive regulation of programmed cell death
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0060740  prostate gland epithelium morphogenesis
GO:0008361  regulation of cell size
GO:0031641  regulation of myelination
GO:0032526  response to retinoic acid
GO:0048384  retinoic acid receptor signaling pathway
GO:0060534  trachea cartilage development
GO:0006367  transcription initiation from RNA polymerase II promoter
GO:0060070  Wnt receptor signaling pathway through beta-catenin

Cellular Component

GO:0016021  integral to membrane
GO:0005654  nucleoplasm
GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0003677  DNA binding
GO:0005515  protein binding
GO:0003708  retinoic acid receptor activity
GO:0046965  retinoid X receptor binding
GO:0043565  sequence-specific DNA binding
GO:0003707  steroid hormone receptor activity
GO:0003700  transcription factor activity
GO:0008270  zinc ion binding