ring finger protein 1

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Synonym

RING1, ring finger protein 1, RNF1, RING finger protein 1, Polycomb complex protein RING1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:99.90 artery/aorta:- vein:- lymphnode:10.10 peripheral blood:54.70 spleen:37.80 thymus:12.90 bone marrow:- adipose:40.30 bone:12.80 skin:9.60
GeneChip cerebrum:8.72 cerebellum:8.95 brain stem:8.59 corpus callosum/glia:8.83 pineal gland:- peripheral nerve:8.65 spine:8.76 retina:- eye:- artery/aorta:8.84 vein:8.68 lymphnode:8.83 peripheral blood:- spleen:8.74 thymus:8.91 bone marrow:8.45 adipose:8.80 bone:- skin:8.66
CAGE cerebrum:3.85 cerebellum:- brain stem:3.88 corpus callosum/glia:3.99 pineal gland:3.85 peripheral nerve:- spine:3.80 retina:- eye:- artery/aorta:3.79 vein:3.74 lymphnode:3.51 peripheral blood:- spleen:3.54 thymus:3.93 bone marrow:- adipose:3.53 bone:- skin:-
RNA-seq cerebrum:3.72 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.07 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.83 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:18.20 prostate:33.80 ovary:37.30 testis:30.30 heart:12.80 muscle:- esophagus:- stomach:42.50 intestine:- colon:17     liver/hepato:42.20        lung:19.60    bladder:- kidney:52 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:18.60 salivary:-
GeneChip uterus:8.94 placenta:8.42 prostate:8.81 ovary:8.91 testis:8.98 heart:8.43 muscle:8.24 esophagus:8.80 stomach:8.72 intestine:8.60 colon:8.65 liver/hepato:8.83 lung:8.89 bladder:- kidney:8.82 pituitary:9.45 thyroid/parathyroid:9.41 adrenal gland:8.80 pancreas:8.39 breast:8.96 salivary:8.84
CAGE uterus:4.04 placenta:3.53 prostate:3.86 ovary:4.00 testis:3.75 heart:3.53 muscle:3.58 esophagus:3.60 stomach:- intestine:3.84 colon:3.73     liver/hepato:3.72    lung:3.62 bladder:3.45 kidney:3.70 pituitary:3.79 thyroid/parathyroid:4.17 adrenal gland:- pancreas:3.57 breast:3.43 salivary:3.77
RNA-seq uterus:- placenta:- prostate:4.50 ovary:5.10 testis:4.63 heart:2.99 muscle:3.77 esophagus:- stomach:- intestine:- colon:3.67     liver/hepato:3.50        lung:4.34    bladder:- kidney:3.93 pituitary:- thyroid/parathyroid:5.45 adrenal gland:4.52 pancreas:- breast:4.17 salivary:-

Gene Information

IDs

Refseq ID NM_002931
Gene ID 6015
Unigene ID Hs.631989
Probe set ID 35685_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000204227
ENSG00000226788
ENSG00000228520
ENSG00000231115
GTEx ID ENSG00000204227
ENSG00000226788
ENSG00000228520
ENSG00000231115

Orthologous Gene

Mouse[1]  NM_009066
Rat[1]  NM_212549

Chromosomal Region

6p21.32  [33,176,272  -  33,180,499]
HSCHR6_MHC_COX  [33,097,900  -  33,102,125]
HSCHR6_MHC_QBL  [33,105,102  -  33,109,329]
HSCHR6_MHC_MCF  [33,346,636  -  33,350,863]
HSCHR6_MHC_DBB  [33,154,182  -  33,158,409]
HSCHR6_MHC_MANN  [33,330,195  -  33,334,422]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1906426
7681583
9199346
9205114
9858531
10369680
10825164
11171983
11583618
12004135
12167161
12167701
12183370
12477932
12589020
14574404
14647293
14999091
15009096
15386022
15489334
15710417
16359901
16624538
16751658
16943429
17134822
17468742
17936708
18029348
18624398
18830248
19047128
19412891
19451220
19549727
19636380
19851445
19913121
19956605
20601937
20628086
20800574
20811636
20819778
21125401
21139048
21282530
21530438
21549307
21596310
21832049
21890473
21988832
22325352
22493164
22897849
22907436
23000965
23022380
23455922
23740775
24163370
24457600
24711370
24816145
24903147

Gene Ontology  (GO ID)

Biological Process

GO:0009952  anterior/posterior pattern formation
GO:0048593  camera-type eye morphogenesis
GO:0016568  chromatin modification
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005737  cytoplasm
GO:0016607  nuclear speck
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0031519  PcG protein complex
GO:0035102  PRC1 complex
GO:0001739  sex chromatin
GO:0000151  ubiquitin ligase complex

Molecular Function

GO:0003682  chromatin binding
GO:0005515  protein binding
GO:0004842  ubiquitin-protein ligase activity
GO:0008270  zinc ion binding