ribosomal protein L9

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Synonym

NPC-A-16, FLJ27456, ribosomal protein L9, OK/SW-cl.103, RPL9, MGC15545, 60S ribosomal protein L9, DKFZp313J1510

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:79.40 cerebellum:12.60 brain stem:- corpus callosum/glia:29.20 pineal gland:593.40 peripheral nerve:214.70 spine:- retina:830.50 eye:229.20 artery/aorta:569.50 vein:1133 lymphnode:202.20 peripheral blood:36.40 spleen:94.50 thymus:51.50 bone marrow:865.90 adipose:363 bone:179.10 skin:86.40
GeneChip cerebrum:11.16 cerebellum:11.52 brain stem:11.21 corpus callosum/glia:11.04 pineal gland:- peripheral nerve:11.45 spine:11.15 retina:- eye:- artery/aorta:11.89 vein:12.07 lymphnode:12 peripheral blood:- spleen:11.83 thymus:12.12 bone marrow:11.36 adipose:12.12 bone:- skin:12.01
CAGE cerebrum:3.11 cerebellum:- brain stem:2.99 corpus callosum/glia:2.98 pineal gland:2.95 peripheral nerve:- spine:2.83 retina:- eye:- artery/aorta:3.37 vein:3.10 lymphnode:3.29 peripheral blood:- spleen:3.18 thymus:2.83 bone marrow:- adipose:3.18 bone:- skin:-
RNA-seq cerebrum:5.05 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.56 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.35 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:173.20 placenta:171.20 prostate:360.50 ovary:931.60 testis:51.90 heart:383.20 muscle:60.30 esophagus:- stomach:106.20 intestine:129.60 colon:101.80     liver/hepato:306.10        lung:307.90    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:655 adrenal gland:- pancreas:1395.90 breast:55.80 salivary:-
GeneChip uterus:12.29 placenta:11.16 prostate:12.17 ovary:12.57 testis:11.50 heart:11.65 muscle:11.60 esophagus:11.67 stomach:11.64 intestine:11.82 colon:11.81 liver/hepato:10.87 lung:11.64 bladder:- kidney:11.54 pituitary:11.76 thyroid/parathyroid:11.79 adrenal gland:11.69 pancreas:12.36 breast:12.13 salivary:12.08
CAGE uterus:3.19 placenta:2.97 prostate:3.12 ovary:3.30 testis:3.57 heart:3.42 muscle:3.54 esophagus:3.23 stomach:- intestine:2.96 colon:3.22     liver/hepato:3.54    lung:3.22 bladder:3.15 kidney:3.22 pituitary:3.36 thyroid/parathyroid:3.49 adrenal gland:- pancreas:4.05 breast:3.49 salivary:3.49
RNA-seq uterus:- placenta:- prostate:3.66 ovary:7.73 testis:5.68 heart:2.56 muscle:5.32 esophagus:- stomach:- intestine:- colon:6.98     liver/hepato:4.33        lung:7.24    bladder:- kidney:5.52 pituitary:- thyroid/parathyroid:3.96 adrenal gland:6.29 pancreas:- breast:6.79 salivary:-

Gene Information

IDs

Refseq ID NM_000661
Gene ID 6133
Unigene ID Hs.412370
Probe set ID 200032_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000163682
GTEx ID ENSG00000163682

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

4p14  [39,455,744  -  39,460,568]

Gene Family (Interpro ID)

IPR000702  Ribosomal protein L6

Link to Pubmed  (Pubmed ID)

8415001
8597601
8722009
9582194
11790298
12477932
12777385
12962325
14567916
15189156
15489334
15635413
16169070
16189514
16196087
16341674
18029348
18274552
18457437
19738201
19805454
19946888
20020773
20972266
21081666
21139048
21145461
21182205
21890473
21906983
21963094
21987572
22178446
22505724
22586326
22623428
22939629
22944692
23000965
23125841
23246001
23398456
23463506
24332808
24457600
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0044267  cellular protein metabolic process
GO:0010467  gene expression
GO:0016071  mRNA metabolic process
GO:0000184  nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0016070  RNA metabolic process
GO:0006614  SRP-dependent cotranslational protein targeting to membrane
GO:0006412  translation
GO:0006414  translational elongation
GO:0006413  translational initiation
GO:0006415  translational termination
GO:0019058  viral infectious cycle
GO:0016032  viral reproduction
GO:0019083  viral transcription

Cellular Component

GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0022625  cytosolic large ribosomal subunit
GO:0005730  nucleolus
GO:0005840  ribosome

Molecular Function

GO:0003723  RNA binding
GO:0019843  rRNA binding
GO:0003735  structural constituent of ribosome