ribosomal protein S18

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Synonym

ribosomal protein S18, Ke-3, RPS18, MGC126837, KE3, D6S218E, MGC117351, HKE3, MGC126835, 40S ribosomal protein S18, KE-3, Ke3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:156.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:445 peripheral nerve:122.70 spine:- retina:355.90 eye:241 artery/aorta:359.70 vein:1799.50 lymphnode:637 peripheral blood:1876.50 spleen:245.80 thymus:51.50 bone marrow:728.20 adipose:363 bone:204.70 skin:172.80
GeneChip cerebrum:11.58 cerebellum:11.76 brain stem:11.61 corpus callosum/glia:11.88 pineal gland:- peripheral nerve:12.21 spine:11.96 retina:- eye:- artery/aorta:12.41 vein:12.66 lymphnode:13.09 peripheral blood:- spleen:12.86 thymus:12.95 bone marrow:12.49 adipose:13.12 bone:- skin:13.34
CAGE cerebrum:3.69 cerebellum:- brain stem:3.44 corpus callosum/glia:3.24 pineal gland:2.99 peripheral nerve:- spine:4.04 retina:- eye:- artery/aorta:5.24 vein:5.35 lymphnode:5.58 peripheral blood:- spleen:4.79 thymus:4.64 bone marrow:- adipose:4.74 bone:- skin:-
RNA-seq cerebrum:7.19 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:10.01 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:9.24 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:473.60 prostate:236.60 ovary:559 testis:64.90 heart:510.90 muscle:863.90 esophagus:- stomach:127.50 intestine:162 colon:50.90     liver/hepato:190        lung:171.10    bladder:- kidney:- pituitary:1159.80 thyroid/parathyroid:327.50 adrenal gland:761.80 pancreas:257.80 breast:18.60 salivary:-
GeneChip uterus:13.13 placenta:12.11 prostate:13.10 ovary:13.38 testis:12.47 heart:12.41 muscle:12.40 esophagus:13.14 stomach:12.62 intestine:12.85 colon:12.91 liver/hepato:11.81 lung:12.45 bladder:- kidney:12.36 pituitary:12.20 thyroid/parathyroid:12.52 adrenal gland:12.56 pancreas:13.39 breast:13.52 salivary:12.83
CAGE uterus:4.90 placenta:4.58 prostate:4.83 ovary:5.63 testis:4.23 heart:4.88 muscle:5.49 esophagus:5.01 stomach:- intestine:4.76 colon:5.22     liver/hepato:4.87    lung:5.25 bladder:4.87 kidney:4.06 pituitary:3.89 thyroid/parathyroid:4.74 adrenal gland:- pancreas:6.67 breast:5.28 salivary:5.49
RNA-seq uterus:- placenta:- prostate:10.14 ovary:10.48 testis:8.93 heart:7.47 muscle:9.60 esophagus:- stomach:- intestine:- colon:10.19     liver/hepato:8.03        lung:10.02    bladder:- kidney:8.10 pituitary:- thyroid/parathyroid:8.33 adrenal gland:9.68 pancreas:- breast:9.72 salivary:-

Gene Information

IDs

Refseq ID NM_022551
Gene ID 6222
Unigene ID Hs.627414
Probe set ID 201049_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000096150
ENSG00000223367
ENSG00000226225
ENSG00000231500
ENSG00000235650
GTEx ID ENSG00000096150
ENSG00000223367
ENSG00000226225
ENSG00000231500
ENSG00000235650

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

HSCHR6_MHC_DBB  [33,217,712  -  33,222,212]
6p21.32  [33,239,787  -  33,244,287]
HSCHR6_MHC_COX  [33,161,393  -  33,165,893]
HSCHR6_MHC_SSTO  [33,379,131  -  33,382,651]
HSCHR6_MHC_QBL  [33,168,626  -  33,173,129]
HSCHR6_MHC_MCF  [33,410,160  -  33,414,664]

Gene Family (Interpro ID)

IPR001892  Ribosomal protein S13
IPR010979  Ribosomal protein S13-like, H2TH

Link to Pubmed  (Pubmed ID)

1872840
6188845
7923143
8441687
8706699
8722009
9582194
11790298
12145273
12477932
12588972
14574404
15189156
15532723
15576338
15635413
15883184
16196087
17361185
18259216
18457437
18685789
19056867
19167051
19596686
19738201
19805454
19834535
19850743
19851445
19946888
20020773
21139048
21145461
21182203
21182205
21256985
21319273
21575865
21693764
21832049
21853274
21890473
21906983
21963094
21987572
22113938
22145905
22178446
22505724
22623428
22797925
22810585
22863883
22939629
23000965
23184937
23246001
23398456
23438482
23455922
23463506
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0044267  cellular protein metabolic process
GO:0010467  gene expression
GO:0016071  mRNA metabolic process
GO:0000184  nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0042254  ribosome biogenesis
GO:0016070  RNA metabolic process
GO:0006614  SRP-dependent cotranslational protein targeting to membrane
GO:0006412  translation
GO:0006414  translational elongation
GO:0006413  translational initiation
GO:0006415  translational termination
GO:0019058  viral infectious cycle
GO:0016032  viral reproduction
GO:0019083  viral transcription

Cellular Component

GO:0005829  cytosol
GO:0022627  cytosolic small ribosomal subunit
GO:0005840  ribosome
GO:0015935  small ribosomal subunit

Molecular Function

GO:0003674  molecular_function
GO:0019843  rRNA binding
GO:0003735  structural constituent of ribosome