S100 calcium binding protein A6

Synonym

S100A6, 2A9, Calcyclin, S100 calcium binding protein A6, Protein S100-A6, S100 calcium binding protein A6 (calcyclin), Prolactin receptor-associated protein, PRA, S100 calcium-binding protein A6 (calcyclin), MLN 4, CABP, S100 calcium-binding protein A6, 5B10, Growth factor-inducible protein 2A9, CACY

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:30.80

cerebellum:12.60

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:184

spine:-

retina:355.90

eye:158.70

artery/aorta:779.40

vein:2266.10

lymphnode:131.40

peripheral blood:236.80

spleen:75.60

thymus:12.90

bone marrow:275.50

adipose:282.30

bone:38.40

skin:144

GeneChip

cerebrum:8.06

cerebellum:8.27

brain stem:8.87

corpus callosum/glia:8.19

pineal gland:-

peripheral nerve:11.03

spine:9.68

retina:-

eye:-

artery/aorta:11.21

vein:11.10

lymphnode:9.57

peripheral blood:-

spleen:9.21

thymus:8.11

bone marrow:10.25

adipose:10.82

bone:-

skin:10.58

CAGE

cerebrum:2.94

cerebellum:-

brain stem:3.70

corpus callosum/glia:3.06

pineal gland:3.06

peripheral nerve:-

spine:4.59

retina:-

eye:-

artery/aorta:6.13

vein:5.21

lymphnode:4.71

peripheral blood:-

spleen:4.11

thymus:1.98

bone marrow:-

adipose:5.78

bone:-

skin:-

RNA-seq

cerebrum:5.74

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:8.96

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:8.32

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:118.50

placenta:87.40

prostate:281.60

ovary:372.60

testis:21.60

heart:127.70

muscle:281.30

esophagus:-

stomach:106.20

intestine:259.20

colon:220.50

liver/hepato:665

lung:166.20

bladder:-

kidney:41.60

pituitary:116

thyroid/parathyroid:491.20

adrenal gland:152.40

pancreas:44.50

breast:297.40

salivary:-

GeneChip

uterus:10.44

placenta:9.93

prostate:9.86

ovary:10.37

testis:7.74

heart:9.80

muscle:7.85

esophagus:11

stomach:10.16

intestine:9.80

colon:10.93

liver/hepato:6.50

lung:11.21

bladder:-

kidney:10.25

pituitary:8.36

thyroid/parathyroid:10.43

adrenal gland:9.08

pancreas:8.04

breast:10.87

salivary:9.31

CAGE

uterus:5.29

placenta:5.43

prostate:5.40

ovary:4.49

testis:4.22

heart:5.42

muscle:4.43

esophagus:5.75

stomach:-

intestine:5.46

colon:6.24

liver/hepato:2.25

lung:6.19

bladder:5.94

kidney:5.51

pituitary:3.05

thyroid/parathyroid:5.15

adrenal gland:-

pancreas:3.32

breast:6.37

salivary:4.72

RNA-seq

uterus:-

placenta:-

prostate:9.73

ovary:7.66

testis:8.00

heart:7.12

muscle:7.16

esophagus:-

stomach:-

intestine:-

colon:9.17

liver/hepato:4.55

lung:10.61

bladder:-

kidney:9.09

pituitary:-

thyroid/parathyroid:7.96

adrenal gland:8.26

pancreas:-

breast:8.39

salivary:-

IDs

Refseq ID	NM_014624
Gene ID	6277
Unigene ID	Hs.275243
Probe set ID	217728_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000197956
GTEx ID	ENSG00000197956

Orthologous Gene

Mouse[1]	NM_011313
Rat[1]	NM_053485

Chromosomal Region

1q21.3 [153,507,075 - 153,508,720]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR002048	Calcium-binding EF-hand
IPR018249	EF-HAND 2

GO:0007409	axonogenesis
GO:0048146	positive regulation of fibroblast proliferation
GO:0007165	signal transduction

GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0031234	extrinsic to internal side of plasma membrane
GO:0005635	nuclear envelope
GO:0005634	nucleus
GO:0048471	perinuclear region of cytoplasm
GO:0001726	ruffle

GO:0005509	calcium ion binding
GO:0048306	calcium-dependent protein binding
GO:0015075	ion transmembrane transporter activity
GO:0005515	protein binding
GO:0042803	protein homodimerization activity
GO:0005523	tropomyosin binding
GO:0008270	zinc ion binding

S100 calcium binding protein A6

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function