ataxin 2

Synonym

ataxin 2, TNRC13, Spinocerebellar ataxia type 2 protein, ATXN2, SCA2, FLJ46772, Ataxin-2, Trinucleotide repeat-containing gene 13 protein, ATX2

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:67.60

cerebellum:125.90

brain stem:-

corpus callosum/glia:58.30

pineal gland:-

peripheral nerve:61.30

spine:224.60

retina:118.60

eye:146.90

artery/aorta:299.80

vein:133.30

lymphnode:40.40

peripheral blood:54.70

spleen:113.40

thymus:51.50

bone marrow:78.70

adipose:-

bone:12.80

skin:96

GeneChip

cerebrum:7.09

cerebellum:6.81

brain stem:7.27

corpus callosum/glia:7.30

pineal gland:-

peripheral nerve:6.99

spine:7.12

retina:-

eye:-

artery/aorta:6.56

vein:6.39

lymphnode:6.38

peripheral blood:-

spleen:6.48

thymus:6.64

bone marrow:6.04

adipose:6.67

bone:-

skin:6.25

CAGE

cerebrum:4.13

cerebellum:-

brain stem:4.23

corpus callosum/glia:4.40

pineal gland:3.96

peripheral nerve:-

spine:4.30

retina:-

eye:-

artery/aorta:4.03

vein:3.65

lymphnode:3.53

peripheral blood:-

spleen:3.41

thymus:3.67

bone marrow:-

adipose:3.68

bone:-

skin:-

RNA-seq

cerebrum:3.15

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.56

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:2.62

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:36.50

placenta:69.20

prostate:169

ovary:37.30

testis:95.20

heart:38.30

muscle:20.10

esophagus:-

stomach:-

intestine:64.80

colon:84.80

liver/hepato:73.90

lung:97.80

bladder:-

kidney:114.40

pituitary:232

thyroid/parathyroid:-

adrenal gland:50.80

pancreas:160

breast:213.70

salivary:-

GeneChip

uterus:7.03

placenta:6.77

prostate:7.10

ovary:7.15

testis:7.20

heart:6.47

muscle:6.31

esophagus:6.53

stomach:6.57

intestine:6.19

colon:6.50

liver/hepato:6.69

lung:6.74

bladder:-

kidney:6.85

pituitary:6.85

thyroid/parathyroid:6.48

adrenal gland:7.01

pancreas:6.08

breast:6.85

salivary:6.29

CAGE

uterus:3.95

placenta:3.88

prostate:3.91

ovary:3.79

testis:4.23

heart:4.07

muscle:3.56

esophagus:3.38

stomach:-

intestine:3.45

colon:3.97

liver/hepato:3.38

lung:4.24

bladder:3.87

kidney:3.50

pituitary:3.89

thyroid/parathyroid:3.40

adrenal gland:-

pancreas:3.37

breast:4.50

salivary:3.03

RNA-seq

uterus:-

placenta:-

prostate:3.28

ovary:3.20

testis:3.65

heart:2.67

muscle:3.27

esophagus:-

stomach:-

intestine:-

colon:2.45

liver/hepato:2.09

lung:3.26

bladder:-

kidney:2.60

pituitary:-

thyroid/parathyroid:2.65

adrenal gland:2.34

pancreas:-

breast:2.63

salivary:-

IDs

Refseq ID	NM_002973
Gene ID	6311
Unigene ID	Hs.76253
Probe set ID	202622_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000204842
GTEx ID	ENSG00000204842

Orthologous Gene

Mouse[3]	NM_009125
Rat[3]	NM_009125

Chromosomal Region

12q24.12 [111,890,018 - 112,037,480]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0008219	cell death
GO:0021702	cerebellar Purkinje cell differentiation
GO:0033962	cytoplasmic mRNA processing body assembly
GO:0048872	homeostasis of number of cells
GO:0040015	negative regulation of multicellular organism growth
GO:0002091	negative regulation of receptor internalization
GO:0050905	neuromuscular process
GO:0048812	neuron projection morphogenesis
GO:0006417	regulation of translation
GO:0016070	RNA metabolic process
GO:0050658	RNA transport
GO:0034063	stress granule assembly

Cellular Component

GO:0005737	cytoplasm
GO:0005794	Golgi apparatus
GO:0005730	nucleolus
GO:0005634	nucleus
GO:0048471	perinuclear region of cytoplasm
GO:0005844	polysome
GO:0030529	ribonucleoprotein complex
GO:0010494	stress granule
GO:0005802	trans-Golgi network

Molecular Function

GO:0005154	epidermal growth factor receptor binding
GO:0005515	protein binding
GO:0008022	protein C-terminus binding
GO:0003723	RNA binding

ataxin 2

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function