stearoyl-CoA desaturase (delta-9-desaturase)

Synonym

SCD1, stearoyl-CoA desaturase (delta-9-desaturase), PRO0998, Stearoyl-CoA desaturase, Delta(9)-desaturase, Acyl-CoA desaturase, FADS5, Fatty acid desaturase, SCD

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:8.30

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:148.30

peripheral nerve:122.70

spine:112.30

retina:-

eye:11.80

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:75.60

thymus:-

bone marrow:-

adipose:80.70

bone:-

skin:9.60

GeneChip

cerebrum:10.83

cerebellum:9.53

brain stem:11.41

corpus callosum/glia:11.79

pineal gland:-

peripheral nerve:10.40

spine:11.81

retina:-

eye:-

artery/aorta:7.71

vein:6.45

lymphnode:7.03

peripheral blood:-

spleen:5.21

thymus:6.47

bone marrow:6.67

adipose:11

bone:-

skin:8.11

CAGE

cerebrum:5.40

cerebellum:-

brain stem:5.88

corpus callosum/glia:6.43

pineal gland:3.65

peripheral nerve:-

spine:6.18

retina:-

eye:-

artery/aorta:3.82

vein:5.18

lymphnode:4.46

peripheral blood:-

spleen:3.11

thymus:2.91

bone marrow:-

adipose:6.22

bone:-

skin:-

RNA-seq

cerebrum:8.61

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.09

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:6.14

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:18.20

placenta:-

prostate:-

ovary:-

testis:8.70

heart:51.10

muscle:-

esophagus:-

stomach:-

intestine:-

colon:8.50

liver/hepato:42.20

lung:14.70

bladder:-

kidney:20.80

pituitary:-

thyroid/parathyroid:-

adrenal gland:152.40

pancreas:8.90

breast:18.60

salivary:-

GeneChip

uterus:6.15

placenta:5.40

prostate:9.57

ovary:6.78

testis:8.41

heart:6.61

muscle:4.64

esophagus:8.36

stomach:6.77

intestine:6.56

colon:7.55

liver/hepato:10.85

lung:8.09

bladder:-

kidney:5.75

pituitary:5.60

thyroid/parathyroid:4.69

adrenal gland:9.24

pancreas:5.15

breast:8.48

salivary:6.96

CAGE

uterus:2.66

placenta:2.51

prostate:2.67

ovary:4.07

testis:4.32

heart:3.97

muscle:2.65

esophagus:4.90

stomach:-

intestine:3.98

colon:4.79

liver/hepato:4.57

lung:4.75

bladder:3.62

kidney:1.99

pituitary:2.02

thyroid/parathyroid:1.30

adrenal gland:-

pancreas:2.34

breast:6.84

salivary:3.48

RNA-seq

uterus:-

placenta:-

prostate:3.45

ovary:6.56

testis:4.60

heart:1.98

muscle:0.45

esophagus:-

stomach:-

intestine:-

colon:4.03

liver/hepato:7.18

lung:5.48

bladder:-

kidney:2.41

pituitary:-

thyroid/parathyroid:5.44

adrenal gland:4.12

pancreas:-

breast:11.09

salivary:-

IDs

Refseq ID	NM_005063
Gene ID	6319
Unigene ID	Hs.597496
Probe set ID	200832_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000099194
GTEx ID	ENSG00000099194

Orthologous Gene

Mouse[8]	NM_024450, NM_009128, NM_009127, NM_183216
Rat [0]

Chromosomal Region

10q24.31 [102,106,877 - 102,124,591]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR015876

Fatty acid desaturase, type 1, core

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0006633

fatty acid biosynthetic process

Cellular Component

GO:0005783	endoplasmic reticulum
GO:0005789	endoplasmic reticulum membrane
GO:0016021	integral to membrane

Molecular Function

GO:0005506	iron ion binding
GO:0004768	stearoyl-CoA 9-desaturase activity

stearoyl-CoA desaturase (delta-9-desaturase)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function