sodium channel, voltage-gated, type III, alpha subunit

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Synonym

sodium channel, voltage-gated, type III, alpha, SCN3A, type III, Sodium channel protein, brain III subunit alpha, Sodium channel protein type III subunit alpha, Voltage-gated sodium channel subunit alpha Nav1.3, Voltage-gated sodium channel subtype III, Sodium channel protein type 3 subunit alpha, NAC3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:28.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:122.70 spine:- retina:237.30 eye:23.50 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:38.70 bone marrow:- adipose:- bone:- skin:14.40
GeneChip cerebrum:6.30 cerebellum:6.95 brain stem:6.40 corpus callosum/glia:4.34 pineal gland:- peripheral nerve:3.75 spine:5.03 retina:- eye:- artery/aorta:4.15 vein:3.91 lymphnode:4.01 peripheral blood:- spleen:3.98 thymus:5.97 bone marrow:3.27 adipose:3.82 bone:- skin:3.51
CAGE cerebrum:2.98 cerebellum:- brain stem:1.93 corpus callosum/glia:1.47 pineal gland:0.64 peripheral nerve:- spine:2.55 retina:- eye:- artery/aorta:0.79 vein:1.65 lymphnode:0.86 peripheral blood:- spleen:0.76 thymus:1.81 bone marrow:- adipose:1.07 bone:- skin:-
RNA-seq cerebrum:0.62 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:22.50 ovary:- testis:13 heart:- muscle:- esophagus:- stomach:- intestine:- colon:8.50     liver/hepato:-        lung:9.80    bladder:- kidney:10.40 pituitary:116 thyroid/parathyroid:- adrenal gland:50.80 pancreas:- breast:- salivary:-
GeneChip uterus:3.50 placenta:3.68 prostate:3.68 ovary:3.30 testis:3.70 heart:4.16 muscle:3.60 esophagus:3.31 stomach:3.97 intestine:3.49 colon:3.92 liver/hepato:3.25 lung:3.17 bladder:- kidney:4.28 pituitary:7.07 thyroid/parathyroid:3.66 adrenal gland:3.42 pancreas:3.06 breast:3.62 salivary:3.29
CAGE uterus:0.83 placenta:0 prostate:0.39 ovary:0.32 testis:0.82 heart:0.70 muscle:0.63 esophagus:0.73 stomach:- intestine:0.61 colon:0.90     liver/hepato:0.14    lung:0.22 bladder:1.15 kidney:0.78 pituitary:3.40 thyroid/parathyroid:0.45 adrenal gland:- pancreas:0.58 breast:1.36 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.00 testis:0.69 heart:0.17 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.06     liver/hepato:0.01        lung:0.00    bladder:- kidney:0.18 pituitary:- thyroid/parathyroid:0.36 adrenal gland:1.05 pancreas:- breast:0.10 salivary:-

Gene Information

IDs

Refseq ID NM_006922
Gene ID 6328
Unigene ID Hs.435274
Probe set ID 210432_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000153253
GTEx ID ENSG00000153253

Orthologous Gene

Mouse[1]  NM_018732
Rat [0]  

Chromosomal Region

2q24.3  [165,944,032  -  166,060,577]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8159690
8889548
9589372
10718198
10827173
11122339
11245985
11566500
12610651
15317864
15548568
16029190
16052353
16344560
16382098
17544618
18784617
19699781
20346423
20379614
22494998
23016767
23333304
23859570
24337656

Gene Ontology  (GO ID)

Biological Process

GO:0006814  sodium ion transport

Cellular Component

GO:0005737  cytoplasm
GO:0001518  voltage-gated sodium channel complex

Molecular Function

GO:0005248  voltage-gated sodium channel activity