coiled-coil domain containing 90A

 jump to detail

Synonym

C6orf79, CCDC90A, coiled-coil domain containing 90A, FLJ20958, chromosome 6 open reading frame 79

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:29.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:52.90 artery/aorta:- vein:- lymphnode:20.20 peripheral blood:- spleen:- thymus:- bone marrow:39.40 adipose:40.30 bone:12.80 skin:19.20
GeneChip cerebrum:6.34 cerebellum:5.64 brain stem:6.74 corpus callosum/glia:6.49 pineal gland:- peripheral nerve:6.74 spine:6.74 retina:- eye:- artery/aorta:6.23 vein:6.26 lymphnode:6.35 peripheral blood:- spleen:5.70 thymus:6.33 bone marrow:5.82 adipose:6.74 bone:- skin:7.13
CAGE cerebrum:3.36 cerebellum:- brain stem:3.61 corpus callosum/glia:3.35 pineal gland:3.49 peripheral nerve:- spine:3.61 retina:- eye:- artery/aorta:3.07 vein:3.09 lymphnode:3.17 peripheral blood:- spleen:3.36 thymus:3.05 bone marrow:- adipose:3.07 bone:- skin:-
RNA-seq cerebrum:3.04 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.59 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.90 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:36.40 prostate:33.80 ovary:74.50 testis:21.60 heart:- muscle:40.20 esophagus:- stomach:21.20 intestine:- colon:25.40     liver/hepato:52.80        lung:14.70    bladder:- kidney:104 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:62.20 breast:55.80 salivary:-
GeneChip uterus:6.42 placenta:6.63 prostate:6.52 ovary:5.81 testis:6.03 heart:6.82 muscle:6.74 esophagus:7 stomach:6.05 intestine:6.70 colon:6.04 liver/hepato:6.94 lung:6.55 bladder:- kidney:7.50 pituitary:6.03 thyroid/parathyroid:7.08 adrenal gland:5.76 pancreas:6.73 breast:6.81 salivary:6.42
CAGE uterus:2.92 placenta:3.36 prostate:2.86 ovary:2.31 testis:2.77 heart:3.42 muscle:3.10 esophagus:3.31 stomach:- intestine:4.26 colon:3.56     liver/hepato:3.88    lung:3.26 bladder:2.75 kidney:3.82 pituitary:3.08 thyroid/parathyroid:3.44 adrenal gland:- pancreas:3.84 breast:4.00 salivary:3.17
RNA-seq uterus:- placenta:- prostate:2.56 ovary:1.99 testis:2.58 heart:2.16 muscle:2.12 esophagus:- stomach:- intestine:- colon:2.09     liver/hepato:2.43        lung:2.44    bladder:- kidney:3.25 pituitary:- thyroid/parathyroid:2.69 adrenal gland:2.14 pancreas:- breast:2.77 salivary:-

Gene Information

IDs

Refseq ID NM_001031713
Gene ID 63933
Unigene ID Hs.214043
Probe set ID 220094_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000050393
GTEx ID ENSG00000050393

Orthologous Gene

Mouse[1]  NM_001081059
Rat[1]  NM_001081059

Chromosomal Region

6p23  [13,791,020  -  13,814,800]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
15342556
16344560
20877624
23178883

Gene Ontology  (GO ID)

Biological Process

GO:0070509  calcium ion import
GO:0051561  elevation of mitochondrial calcium ion concentration
GO:0006851  mitochondrial calcium ion transport

Cellular Component

GO:0031305  integral to mitochondrial inner membrane

Molecular Function

GO:0005515  protein binding