nuclear prelamin A recognition factor-like

 jump to detail

Synonym

HPRN, PRN, NARFL, FLJ21988, LET1L, IOP1, nuclear prelamin A recognition factor-like

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:91.30 cerebellum:163.70 brain stem:- corpus callosum/glia:116.60 pineal gland:148.30 peripheral nerve:30.70 spine:112.30 retina:- eye:41.10 artery/aorta:30 vein:- lymphnode:30.30 peripheral blood:54.70 spleen:170.20 thymus:180.40 bone marrow:- adipose:121 bone:89.60 skin:9.60
GeneChip cerebrum:6.84 cerebellum:7.05 brain stem:6.78 corpus callosum/glia:6.88 pineal gland:- peripheral nerve:6.62 spine:6.67 retina:- eye:- artery/aorta:6.82 vein:6.75 lymphnode:6.98 peripheral blood:- spleen:6.76 thymus:6.71 bone marrow:6.59 adipose:6.79 bone:- skin:6.79
CAGE cerebrum:2.99 cerebellum:- brain stem:2.95 corpus callosum/glia:3.32 pineal gland:2.16 peripheral nerve:- spine:2.69 retina:- eye:- artery/aorta:2.28 vein:3.15 lymphnode:2.81 peripheral blood:- spleen:2.71 thymus:2.97 bone marrow:- adipose:2.65 bone:- skin:-
RNA-seq cerebrum:2.03 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.65 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.99 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:47.40 prostate:101.40 ovary:74.50 testis:21.60 heart:51.10 muscle:- esophagus:- stomach:21.20 intestine:226.80 colon:33.90     liver/hepato:10.60        lung:48.90    bladder:- kidney:52 pituitary:- thyroid/parathyroid:- adrenal gland:152.40 pancreas:- breast:27.90 salivary:656.80
GeneChip uterus:6.65 placenta:6.54 prostate:6.80 ovary:6.68 testis:6.54 heart:6.78 muscle:6.78 esophagus:6.92 stomach:6.77 intestine:6.92 colon:6.64 liver/hepato:7.08 lung:6.95 bladder:- kidney:7.02 pituitary:6.85 thyroid/parathyroid:6.88 adrenal gland:6.81 pancreas:6.74 breast:6.86 salivary:6.76
CAGE uterus:2.69 placenta:2.58 prostate:2.80 ovary:2.46 testis:2.62 heart:2.43 muscle:2.51 esophagus:2.60 stomach:- intestine:2.85 colon:3.02     liver/hepato:2.81    lung:2.49 bladder:2.37 kidney:2.84 pituitary:2.68 thyroid/parathyroid:2.71 adrenal gland:- pancreas:2.76 breast:2.19 salivary:3.13
RNA-seq uterus:- placenta:- prostate:2.59 ovary:2.63 testis:2.52 heart:1.87 muscle:2.01 esophagus:- stomach:- intestine:- colon:1.73     liver/hepato:2.13        lung:1.42    bladder:- kidney:2.76 pituitary:- thyroid/parathyroid:2.61 adrenal gland:2.88 pancreas:- breast:2.24 salivary:-

Gene Information

IDs

Refseq ID NM_022493
Gene ID 64428
Unigene ID Hs.513247
Probe set ID 218742_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000103245
GTEx ID ENSG00000103245

Orthologous Gene

Mouse[1]  NM_026238
Rat[1]  NM_001013183

Chromosomal Region

16p13.3  [779,753  -  791,002]

Gene Family (Interpro ID)

IPR003149  Iron hydrogenase, small subunit-like

Link to Pubmed  (Pubmed ID)

8125298
11157797
12477932
14702039
16956324
18270200
19864422
20881960
21832049
21906983
22678362
23585563
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0016226  iron-sulfur cluster assembly
GO:0032364  oxygen homeostasis
GO:0006355  regulation of transcription, DNA-dependent
GO:0001666  response to hypoxia

Molecular Function

GO:0051539  4 iron, 4 sulfur cluster binding
GO:0046872  metal ion binding