bromodomain containing 9

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Synonym

LAVS3040, FLJ13441, UNQ3040/PRO9856, DKFZp686L0539, PRO9856, BRD9, Rhabdomyosarcoma antigen MU-RMS-40.8, bromodomain containing 9, Bromodomain-containing protein 9

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:7.19 cerebellum:7.44 brain stem:7.07 corpus callosum/glia:7.21 pineal gland:- peripheral nerve:7.25 spine:7.09 retina:- eye:- artery/aorta:7.41 vein:7.18 lymphnode:7.47 peripheral blood:- spleen:7.32 thymus:7.90 bone marrow:7.22 adipose:7.43 bone:- skin:7.33
CAGE cerebrum:3.64 cerebellum:- brain stem:3.50 corpus callosum/glia:3.70 pineal gland:3.58 peripheral nerve:- spine:3.77 retina:- eye:- artery/aorta:3.35 vein:3.43 lymphnode:3.35 peripheral blood:- spleen:3.05 thymus:3.52 bone marrow:- adipose:3.00 bone:- skin:-
RNA-seq cerebrum:2.31 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.31 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.16 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:7.27 placenta:7.06 prostate:7.07 ovary:7.27 testis:7.60 heart:7.02 muscle:7.15 esophagus:7.13 stomach:7.31 intestine:7.13 colon:7.12 liver/hepato:6.98 lung:7.44 bladder:- kidney:6.95 pituitary:7.42 thyroid/parathyroid:7.27 adrenal gland:7.12 pancreas:7.33 breast:7.42 salivary:6.97
CAGE uterus:3.57 placenta:2.86 prostate:3.20 ovary:2.95 testis:3.47 heart:3.54 muscle:3.54 esophagus:3.02 stomach:- intestine:2.51 colon:3.15     liver/hepato:2.19    lung:3.13 bladder:3.07 kidney:2.70 pituitary:3.53 thyroid/parathyroid:2.70 adrenal gland:- pancreas:3.47 breast:3.02 salivary:3.75
RNA-seq uterus:- placenta:- prostate:2.38 ovary:2.44 testis:2.80 heart:0.66 muscle:2.21 esophagus:- stomach:- intestine:- colon:2.39     liver/hepato:1.67        lung:2.05    bladder:- kidney:2.19 pituitary:- thyroid/parathyroid:1.59 adrenal gland:2.76 pancreas:- breast:1.62 salivary:-

Gene Information

IDs

Refseq ID NM_001009877
Gene ID 65980
Unigene ID -
Probe set ID 220155_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000028310
GTEx ID ENSG00000028310

Orthologous Gene

Mouse[1]  NM_001024508
Rat[1]  NM_001107453

Chromosomal Region

5p15.33  [850,406  -  892,939]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
12601173
12975309
14702039
15489334
18559093
19471022
20379614
21693764

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0016568  chromatin modification
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005575  cellular_component

Molecular Function

GO:0070577  histone acetyl-lysine binding
GO:0003676  nucleic acid binding